Pyrgilauda ruficollis (rufous-necked snowfinch): 121364165
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Entry
121364165 CDS
T07608
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pruf04515
]
121364165
Cell adhesion molecules [BR:
pruf04515
]
Cadherins
Protocadherins
121364165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
RibLong
Motif
Other DBs
NCBI-GeneID:
121364165
NCBI-ProteinID:
XP_041343146
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MKPRKSEEPLPGRAGALILVLCLSGMGAETARYSVPEEAERGSFVANIAKDLGLTGEELL
ARQARVVPEGEKQYLQLNQHTGDLVVREQMDREELCGQSEPCLVRFQVLLENPLQSFRAE
VRLADINDHAPVFLNKEIILKMPESAMPGTRFLLESANDPDVGNNSLQHYSISSNEYFHV
YTQRRNDGGRYAELVLDRALDREQQAEVAFIITGVDGGTPPRSGTALIRVVVLDINDNIP
VFTQTLYKVSVMENSSENSIVAVVSASDLDAGTNGEIVYSIFQNSEENLQTFEINPETGH
IRLKKSLDYEEKKTYEIDVQAIDGGGLSTHCKVEVQVKDVNDNVPEVIVTSLTSTLSEAA
PPDTVVALFNVRDRDSGDNGRTTCELMGEQPFRITLLAADAYALVTSETLDREQVEEYNV
TVRARDEGSPALSASKNLLVRLFDVNDNAPTFTQAIYTMVMSENEPAGRSLGRLSATDPD
AGENARVRYSLVPPLTGTLTAASFVSVDAESGTVRSLRPLDYEKVPAFEVRVRAADGGSP
PLSAQAVLRIVVRDENDNAPVLLHPAPDSSAAGELVPRWAPSGYLVAKVVAVDADAGQNA
WLSYELAKATEPALFRVGLHSGEVRTARAVTERDAARQRLIVLVRDRGQPPRSATATLAV
ALVDDFSDAFHQLGHDPASGQQPQIAEEEMLTTYLIVSLCCVSSLFLLSVLVLTANTLCK
ARVRAELPPPSPRCYADEDFSSDGLGVGSTGTLSPAYRYEMCMTSGSGRSEFRFLRPILP
SLHSNAEAGLDKDEEPLRHSQPACDREAQAGRTASPPF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaggaagagcgaggaaccgctcccggggcgagcaggcgctctgatccttgtc
ctctgcctctcggggatgggagcagaaaccgctcggtactctgtgcccgaagaggcggag
agaggctcttttgtggcgaatatcgctaaggatttgggactaaccggtgaggagttattg
gctcgtcaggctcgagtagttcctgaaggagaaaagcagtatttacagctgaaccagcac
accggggatttggtggtgagagagcaaatggaccgggaagagctgtgtggacagagcgag
ccctgcttggtgcgctttcaggtgctgctggagaacccactgcagtccttccgagctgag
gtaagactcgccgatataaatgatcatgctcctgtgttcttaaataaagagataatttta
aagatgccggaatctgcaatgccgggcactcggtttttgttggaaagcgctaacgatcca
gacgtggggaacaatagtcttcagcattatagtatcagctcgaacgagtatttccatgtg
tacacccagcggagaaatgacggcgggaggtatgccgagctggtgttggatcgagccctg
gaccgagagcagcaggcagaagttgctttcataatcacgggtgtggatggtgggactcca
ccgcggtctggcacagctttaatccgcgtggtagtcctggatataaacgacaacatcccg
gtatttacccagactctgtataaagtctctgtaatggaaaatagctcagagaacagcata
gtggccgtagtgtctgctagcgatttagacgcaggaacgaatggggaaatagtgtattcc
atctttcaaaattcagaagaaaatctccaaacgtttgaaataaacccagagacaggtcat
attcgactcaaaaagtctttggattatgaagaaaaaaagacctatgagatagatgtccaa
gccatagatggagggggcctgtccacgcattgcaaggtggaggtgcaggtgaaggacgtg
aacgacaatgtccccgaggtgatcgtcacctcgctcaccagcaccctctcagaagccgcc
ccgccggacaccgtggtggccctcttcaacgtcagggaccgggactcgggggacaatggc
aggacgacctgcgagctgatgggagagcaacccttcaggatcactctgctggcagccgac
gcgtacgcgctggtgacatcagagacgctggaccgggagcaggtggaggaatacaacgtg
acagtgcgagctcgagacgagggctcccccgccctctcggcatccaagaacctgctcgtg
cggctctttgatgtgaacgacaacgcacccaccttcacccaggccatttacaccatggtg
atgagcgaaaatgagcccgcggggaggagcctgggccgtctcagtgccacggaccctgat
gcgggagagaacgcccgtgtcagatactcgctagtgccgccactgacaggcaccctcacc
gcggcatcattcgtgtcagtggacgcggagagtggaactgtccggagtttgcgcccactg
gactacgagaaggtccctgccttcgaggtgagagtgcgcgcagccgacggcggctccccg
ccgctcagcgcccaggccgtgctgcgcatcgtcgtgcgggacgagaacgataacgcgccc
gtgctgctgcacccggcccccgacagcagcgcggccggagagctggtgccgcgctgggca
ccctccggctacctggtggccaaggtggtggcggtggacgcggacgcggggcagaacgcg
tggctgtcctacgagctggccaaggccacggagccggcgctgttccgcgtggggctgcac
agcggcgaggtgcgcacggcgcgggccgtgacagagagggacgcggcccggcagaggctc
atcgtgctggtgcgggaccgcgggcagccgccgcgctctgccactgccacccttgccgtg
gcactggtggacgatttctccgatgccttccaccagcttggccacgatcctgcgagcgga
cagcagccgcagattgccgaggaggaaatgctcaccacttacctcattgtctccttgtgc
tgcgtctcatcccttttcctcttgtccgtcctcgtcttaacggcgaacaccctctgcaaa
gctcgtgtccgggcagagcttcctcctccctctcccagatgctacgcggacgaagatttc
tccagcgacggcttgggcgtgggcagcacgggcactctgtcgccggcttaccgctacgaa
atgtgtatgaccagcggctcggggaggagcgaattccggttcctgagacccatcctgccc
agccttcatagcaatgctgaggcggggctggacaaggacgaggagccgctacgccactcg
cagcctgcctgcgaccgggaagcccaggcggggagaacagcctctcctcccttttag
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