Pyrgilauda ruficollis (rufous-necked snowfinch): 121364220
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Entry
121364220 CDS
T07608
Symbol
ITGB1
Name
(RefSeq) integrin beta-1 isoform X1
KO
K05719
integrin beta 1
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03271
Virion - Rotavirus
pruf04145
Phagosome
pruf04510
Focal adhesion
pruf04512
ECM-receptor interaction
pruf04514
Cell adhesion molecules
pruf04530
Tight junction
pruf04810
Regulation of actin cytoskeleton
pruf04820
Cytoskeleton in muscle cells
pruf05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
121364220 (ITGB1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
121364220 (ITGB1)
04514 Cell adhesion molecules
121364220 (ITGB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121364220 (ITGB1)
09144 Cellular community - eukaryotes
04510 Focal adhesion
121364220 (ITGB1)
04530 Tight junction
121364220 (ITGB1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
121364220 (ITGB1)
04810 Regulation of actin cytoskeleton
121364220 (ITGB1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121364220 (ITGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121364220 (ITGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pruf04147
]
121364220 (ITGB1)
04515 Cell adhesion molecules [BR:
pruf04515
]
121364220 (ITGB1)
04090 CD molecules [BR:
pruf04090
]
121364220 (ITGB1)
Membrane trafficking [BR:
pruf04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
121364220 (ITGB1)
Exosome [BR:
pruf04147
]
Exosomal proteins
Proteins found in most exosomes
121364220 (ITGB1)
Cell adhesion molecules [BR:
pruf04515
]
Integrins
Integrin beta subunits
121364220 (ITGB1)
CD molecules [BR:
pruf04090
]
Proteins
121364220 (ITGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
121364220
NCBI-ProteinID:
XP_041343267
LinkDB
All DBs
Position
Unknown
AA seq
805 aa
AA seq
DB search
MAETNFKWLTCAGVLCCLLWNGFAQQGGSDCIKANAKSCGECIQAGPNCGWCKKTDFLQE
GEPTSARCDDLAALKSKGCPMEDIENPRGSKQVLENREVTNRKKGAAEKLKPEAITQIQP
QKLSLHLRVGEPQTFSLKFKRAEDYPIDLYYLMDLSYSMKDDLENVKSLGTALMLEMEKI
TSDFRIGFGSFVEKTVMPYISTTPAKLRNPCTGDQNCTSPFSYKNVLSLTSEGNKFNELV
GKQHISGNLDSPEGGFDAIMQVAVCGEQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLP
NDGKCHLENNVYTMSHYYDYPSIAHLVQKLSENNIQTIFAVTEEFQAVYKELKNLIPKSA
VGTLSSNSSNVIQLIIDAYNSLSSEVILENTKLPKGVTISYKSFCKNGVNDTQEDGRKCS
NISIGDEVRFEINITANECPKKEQNETIKIKPLGFTEEVEINLQFICECQCQSEGEPNSP
ACHAGNGTFECGACRCNEGRIGRLCECSTDEVNSEDMDAYCRRENSTEICSNNGECICGQ
CVCKKRENTNEVYSGKYCECDNFNCDRSNGLICGGNGICKCRVCECFPNFTGSACDCSLD
TTPCLASNGQICNGRGTCECGTCNCTDPKFQGPTCEMCQTCLGVCAEHKDCVQCRAFDKG
EKKETCSQECMHFNMTRVESRDKLPQPGQPDPLSHCKEKDVDDCWFYFTYSVNSNGEANV
HVVETPECPSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKW
DTQENPIYKSPINNFKNPNYGRKAG
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atggccgagactaatttcaaatggctcacgtgtgctggcgtcctctgttgcttgctatgg
aatggatttgcccagcaaggtggaagcgactgcataaaagcaaatgcaaagtcatgtggg
gaatgtatacaagcaggaccaaactgtggctggtgtaaaaaaacagactttttgcaagaa
ggagagccaacatctgcccggtgtgatgacttggcagccctgaagagtaaaggctgccct
atggaggatatagagaatcccagaggcagcaaacaggtgctcgaaaatagagaagtaaca
aatcgtaagaaaggtgctgcagagaagctgaaaccagaagccattacccagatccagcca
cagaaattatcactgcatctaagagtcggggaaccccagacattttcattaaaattcaag
agagctgaagactaccccattgacctttattatcttatggacctctcctattctatgaaa
gatgatttagagaatgtaaaaagtcttggaacggctctgatgttagagatggaaaaaata
acttcggactttcggattggctttggttcttttgtggagaaaactgtgatgccttatata
agtacaacaccagccaaactcagaaatccttgtacaggggaccagaactgcacaagtcca
tttagctataaaaatgtgctcagccttaccagtgaaggaaacaaattcaatgaacttgta
ggcaaacagcacatttctgggaacttagattctcctgaaggtggatttgatgcaataatg
caggttgcagtttgtggggaacaaattggctggaggaatgttacaagactattagtgttt
tccacggatgctggattccactttgcaggagatggtaaacttggtggaattgttctgcca
aatgatgggaaatgtcatctggaaaataatgtgtacacaatgagccactattacgattat
ccctctattgctcatctggtacagaaacttagtgagaacaatattcagacaatctttgct
gttactgaagagtttcaggcagtctataaggaactgaaaaatctgataccaaaatcagca
gtgggaacattgtcttcaaattccagcaatgtgattcagctgatcattgatgcatataat
tccctttcttcagaggttatcctggaaaatactaagctaccaaaaggagtgaccatcagt
tacaagtctttctgcaagaatggagtgaatgacacacaagaagatggaaggaagtgttct
aacatttcgattggagatgaggttagatttgagattaatataacagctaatgaatgtcca
aagaaagaacaaaatgaaacaattaaaattaaaccactgggattcacggaagaagttgaa
attaatctccagttcatctgtgagtgtcagtgtcaaagtgaaggagaacctaacagtcca
gcctgccatgcaggaaatggaacatttgaatgtggtgcgtgcagatgtaatgaaggacgt
atcggaagactatgtgaatgtagcacagatgaagtaaatagtgaggatatggatgcttac
tgcaggagggagaacagcacagaaatctgcagtaacaatggagaatgcatttgtggacaa
tgcgtgtgcaagaaaagggagaacaccaatgaggtgtattctggcaaatactgtgaatgt
gacaacttcaactgtgatcgatcaaatggtttaatctgtggaggaaacgggatctgcaag
tgcagagtgtgcgagtgtttccccaacttcactggcagcgcctgcgactgttccttggat
actacaccgtgtttggcatccaatgggcagatttgcaatggaagaggaacctgtgaatgt
ggcacctgtaactgtacagatcccaaattccaaggccccacctgtgaaatgtgtcagact
tgcctcggtgtctgtgcagagcacaaggactgtgttcagtgcagagctttcgacaaggga
gagaagaaggagacgtgttcccaggagtgtatgcacttcaacatgacgcgcgtggagagc
cgggacaagctgccacagcccggccagcctgaccccctgtcccactgcaaagagaaggat
gttgatgactgctggttctacttcacttactctgtcaactcaaatggtgaagccaatgtg
cacgtggtggagaccccagagtgccccagcggtcctgacatcattcccattgtagccggt
gtggttgctggaattgttcttattggacttgcattattattgatttggaaactactaatg
atcattcatgacagaagagaatttgctaaatttgaaaaggagaagatgaatgccaagtgg
gatacgcaagaaaatccaatatacaagagccctattaacaatttcaagaatccaaactat
ggacgtaaagctgggtga
DBGET
integrated database retrieval system
