Pyrgilauda ruficollis (rufous-necked snowfinch): 121364240
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Entry
121364240 CDS
T07608
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121364240 (SH3TC1)
Membrane trafficking [BR:
pruf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121364240 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_2
ARM_TT21_4th
TPR_10
SH3_1
ARM_TT21
TPR_1
Csd3_N
SH3_2
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
121364240
NCBI-ProteinID:
XP_041343339
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MESLAVAGGTSMLSTNTIVPALEGEQDRNLEREETEQEMCRCDCKHVESNAAISTLRDGV
GMDTLQEQMECSPSEKCMNVSSRTLPSQAENFPTDISLKLTMVKRKSGCPDPRLQRQLRG
QLRLLENDSKEVMTVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFLTYHSLGFINHCME
NLFLDQSFWLYSQEEEDTGIEVCINEKSLNLMYRSLLVQEGTFFGLYPDNTIRKMMVTDN
EMTYFETGAFTGDVKGGSVDSDMPMWSNASLEPLEPFHQWFLKGYSNPIDFSYKNESKSI
RKVARGSCLAVMNHESIVSEELSFQEGDKIEILGYFIECMEWFLGRHEFTGQIGFVKTGH
VKLDLSRNKLWRMVTSLLPTDELEEPEFQKAHECEIARSPSSPGSTSKNGKIEELLKNFK
NLEATQAEEPTAEGKESAGSSKTEIFPLPEGPCFHICQEDIQASDFFEPLLLFLNRKEYE
SNFKSLYNFSYSFINSMFYGFSEEEELVNFLRLAREAAKKAGLSWALARLCFLLGRLSVK
KLKFSQARVYFEEALRAVAGGFSDLYFVIALYTNLTVIYLTQKNKEKCTHIFDKAASLLM
GIPNYICSADLESDILKYALKRTILSQNKHAEARACFLLAKHYSARKQHQEALPFLERFQ
LLLNDLGLQNSLSNNCYFKLAESYHEKCLPHIVLSCMKVTSPQSSSTLMDSLKRIDLVIK
NAPKLYGLRKLRQIFPSQIAPYLIQALSSVSTNEEEGLCSTIYLSLAKLYSHHKQYGKAI
AYMMKALDSASAKPEETINYLVSLAWLYILYKQYEVALAILNAVVGSAWSSPQQLGIAYN
MLAIALKRTNNTKEAAESYYKALCLSEETDMAHNQAIALANFGALCLHAAASKLAEHYFI
RAVKLFSKLPIMDCGQDFIQVLLQLGCYYVGGTEREKGRFYYEWAFLVAMETSHLESQLQ
VIKLLCHFYSAVAPNETQCVIYNEYQLSLARKMSNKVLEGQILETISQLYLSLGTERAYR
SALEYTKRSLGIFIDLQKKEKEAYAWLRAGKIYYVLRQNELVDLYIQVAQDAALCTGDPN
LGMELFEAAGDIFFNGTWEKEKAVTFYRDRALPLAVQMGNKTTELRLCNKLVELLMNLKA
YEESLEYARVALVLSVKLGNQLNERIAYHRLAAIHHHLGHCELAEHFYLKALSLCSSPLE
FEEETLYYVKVYSILGDIIFYDLKDPFDAAGYYHLALAAAMDLGNKKAQLKIYTRLAVIY
HNFLVDREMSLFFYQKARTFATELNVRRINLAPDQCYKSS
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttggccgtggcaggtggcacgtctatgctcagcactaacaccattgtccct
gctctggagggagagcaagacaggaacttggagagggaagaaacagagcaggaaatgtgc
aggtgtgactgcaaacatgtggagagcaatgctgccatcagcaccctcagggatggagtt
gggatggacacgttgcaagaacaaatggagtgttctccaagtgaaaaatgcatgaatgtc
agttcaaggacccttcccagtcaggcagagaattttccaactgatatctccctgaagtta
acaatggtgaaaagaaagagtggatgtcctgatcccaggctccaaagacagctcagaggg
cagctccgtctcctggaaaatgacagcaaggaggtgatgactgtcttcagtgagctttct
gccagactcctgtctattcacagtgatcaagatttaatagtggtgacatttaaaactttt
gaagaaatatggaagtttctaacctaccactcactgggttttataaatcattgcatggag
aatttattcctagaccagtctttctggctatattcccaagaggaggaagatacaggcatt
gaagtctgtataaatgaaaaatcattaaatttgatgtacagaagtctgctagtacaggaa
ggaactttttttggtttatatcctgataatacgataagaaagatgatggttacagacaat
gaaatgacttattttgagactggggcttttactggagatgttaaaggtggatctgtggat
agtgacatgcccatgtggtctaatgcttccctggagccattggagcctttccatcagtgg
tttcttaaagggtattctaatcccattgatttttcgtataaaaatgaatctaagtctatc
agaaaagttgcaaggggatcctgtctagctgtgatgaatcatgaaagtattgtgtcagaa
gaactgagtttccaggaaggggacaaaattgagatccttggctacttcattgaatgcatg
gaatggtttcttggaagacatgagtttactggccaaataggttttgtaaagacaggtcat
gttaaactggacttatctagaaacaagttgtggagaatggtcacatctttgctgcccact
gatgagttagaagaacctgaatttcagaaagcgcatgaatgtgaaattgcacgctcacct
tctagcccaggatccactagcaagaatggcaagatagaagaattgctgaagaacttcaag
aatttggaggccactcaagctgaagagccaactgctgaagggaaggaatctgctggctct
tcaaagactgaaatatttcctctacctgaagggccttgcttccacatatgtcaggaagat
attcaagcctctgacttctttgagcccttgctacttttcttaaataggaaagagtatgag
agcaacttcaaaagcctgtataatttctcttattcatttataaatagcatgttttatgga
ttttcagaagaagaagaactggttaattttttaagattagcaagggaagcagcaaagaaa
gcaggtctgtcctgggcactagcaaggctgtgctttctcttaggcaggctcagtgtcaaa
aagctgaagttttcccaagctcgtgtgtattttgaggaagcattgagagcagtagctgga
gggtttagtgatttgtactttgtgattgctctttatacaaatctaacagtcatctacttg
acccagaagaacaaagaaaagtgtactcatatttttgacaaggctgcatctcttctcatg
ggaattcccaactacatttgcagtgctgacctggagtcagatatactgaaatatgctctg
aagaggacaattttgagccagaacaaacatgcagaggcaagggcatgctttctgctggca
aaacattacagtgcacgcaaacaacaccaagaggcactgccattcttggaaaggtttcag
ctgttgctcaatgacctgggtttacaaaacagtttatccaacaactgttacttcaaactg
gcagagtcctaccacgaaaagtgtttgccacacattgtgttaagttgcatgaaggttacc
tctccccagagctccagtaccttaatggattccctgaaaaggattgatttagtcatcaaa
aatgctcccaaactatatggcctgagaaaactcagacaaatattcccatcccaaattgca
ccttacctcatacaagcactttcttctgtctctactaatgaggaggaaggactgtgcagc
actatctatctcagcttagcaaagctgtacagccatcacaaacagtatgggaaagccatt
gcttacatgatgaaagcactggactctgcttctgctaagccagaggaaacaatcaactat
ttggtttcacttgcttggctttacattctttacaagcaatatgaagtggctttagccatt
ttaaatgctgttgtaggctctgcatggagcagtcctcagcagcttggcattgcttacaac
atgcttgccattgctttgaaaaggacaaacaacacaaaagaagctgctgagagctactac
aaagctctgtgtctttcagaagagactgacatggcccataaccaagccatagccctggct
aattttggggcactctgcctgcatgcagcagccagcaagctggcagaacattattttatc
agggcagttaagctattctccaagcttccgattatggattgtggtcaagattttatccaa
gtcctccttcagctgggatgttattatgttggtggaaccgaaagagagaaaggaaggttt
tattatgaatgggcttttttagttgcaatggagacaagtcatctggagagtcagctgcaa
gtgattaaactgctgtgtcatttctacagtgcagttgctcccaatgagactcagtgtgtc
atctacaatgaatatcaactatctttagccagaaaaatgtccaacaaagttctggaggga
caaattttggaaactattagtcagctttatttgtctttaggaacagaaagggcttacagg
tcagctctggaatataccaaaagaagccttggaatatttatagatctccagaaaaaagag
aaggaggcatatgcttggctccgggcaggaaagatatattatgttctgaggcagaacgag
cttgtggatctttatattcaggttgctcaggatgctgctctttgcacaggagatccaaat
ttaggaatggaattgtttgaagctgctggagacatatttttcaatggtacttgggaaaag
gagaaagcagtgactttctacagggacagggctctcccacttgctgttcagatgggcaac
aaaaccactgaactcagattatgtaataaattggtggaattgctgatgaatctgaaggct
tacgaagaaagtctggaatatgcaagagtagctcttgtcctcagtgtaaaattaggaaat
cagctaaatgaaagaatagcttaccatcgcctggcagccatccatcaccatttgggtcac
tgtgaactagctgaacacttctatttaaaggccttgtccctctgttcctctcctctggag
tttgaggaggaaacactctattatgtcaaggtgtactcaatcttaggagatattatattc
tatgaccttaaggacccttttgatgcagctggctattaccacctggcactcgctgctgcc
atggacctgggcaataaaaaagctcaactgaagatttacaccagacttgctgtgatctac
cataacttcctcgtggatcgggaaatgtctctcttcttttaccaaaaggcaagaaccttt
gcaacagagctgaatgtaaggagaataaatttagctcctgatcagtgttacaagagttca
taa
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