Pyrgilauda ruficollis (rufous-necked snowfinch): 121364264
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Entry
121364264 CDS
T07608
Symbol
DDX10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pruf03009
]
121364264 (DDX10)
Enzymes [BR:
pruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
121364264 (DDX10)
Ribosome biogenesis [BR:
pruf03009
]
Eukaryotic type
90S particles
Helicases
121364264 (DDX10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
121364264
NCBI-ProteinID:
XP_041343351
LinkDB
All DBs
Position
Unknown
AA seq
876 aa
AA seq
DB search
MGRPGGGGAAAAAMDPVRSFERWKKKYTRRTKRLRLQRKERKKPEWQVERENIGRLVQRY
PEINASEIQRFSDFPLSKKTLKGLQESQYRVVTEIQRQTIGLALQGKDVLGAAKTGSGKT
LAFIVPALELLYRQQWTSADGLGVLIISPTRELAYQTFKVLRKVGKNHEFSAGLIIGGKD
LKEESERIHHINMLICTPGRLLQHMDETSYFYASDLQMLILDEADRILDMGFADTMNAII
ENLPKKRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKAKFSTPATLDQNYVVCELQQK
VNMLYSFLRTHLKKKSIVFFASCKEVQYLFRVFCKLQPGLPVLALHGKQQQMKRMEVYTC
FVRKKAAVLFATDIAARGLDFPAVNWVIQFDCPEDANTYIHRVGRTARYKEGGEALLVLL
PSEEKGMVEQLAQRKVPISEIKINPEKLTDIQKRLQAFLAQDQELKEKAQRCFVSYLRSV
YLMKNKEVFDVFKLPLAEYALSLGLAMAPRVRFLQRVRKQLCANEVANGTDHLEETEQNE
NALTLVNEETVEKRGTNFSAKTSVIKTKEKQRRKEAEECSVSSGNAEDSGESEDESKEVS
EEEKEVLVPNRGPKSDSMQFFEDDDDDDDDEDNTEGLDLLTVKQRDVFGVETKDNPAPTT
SKLKMKKKATKTQEAKKILKKKFKVNTKIVFTEDGELVQQWPPVQKSSLAQADEEDDASG
INLDKAKEILREEDKFDKEEYRKKVKEKHREKRLKEKAARREARNKNAQAEEETVAFLDH
SGSEEEFDPSTLPDPDKYKDSDAEQDSESEDSYSELEEKTGRKKRSYSNSATAEEMPLKR
KKMHFSQEEDPCLPLDTGLSLAEDEELVLHLLNSHN
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggccggcccggcggcggtggggccgcagcggccgccatggaccccgtgcgcagcttc
gagcgctggaagaagaaatacacccggcggacgaagaggctgcggctgcagcgcaaggaa
aggaagaagcccgagtggcaggtggagcgggagaacatcggccgcctggtgcagcgctac
cccgagataaatgcaagtgaaatccaaagattttcagattttcctttgtcaaagaaaacc
ctaaaaggactgcaggaatctcagtatcgtgtggtaacagagatacagaggcaaaccata
ggtttggctttacaaggtaaagatgtacttggagctgcaaagactggatcaggcaaaacg
ttggcttttattgttccagctttggaactcctctatcgccagcagtggacttcagctgat
ggcctgggggttttgataatctcgcctacccgggagctggcatatcaaaccttcaaggtt
ctgcgtaaagtggggaagaatcatgagttctcagctggccttatcattggaggaaaggat
ctgaaggaagagtctgaaagaatccaccacataaatatgctaatttgcactccaggacgg
cttttacaacacatggatgaaacatcatatttctatgcatctgatctgcaaatgttgatt
cttgatgaagctgacagaattctagacatggggtttgctgatacaatgaatgcaatcata
gaaaatctacctaagaaacgccagaccttgcttttttctgcaacacaaacaaaatctgtg
aaggatcttgcacggctgagtctgaaagatccagaatatgtttgggttcatgagaaagcc
aaattcagtaccccagcaactttggatcagaactatgttgtctgtgagcttcagcaaaaa
gtaaacatgctatactctttcctgagaactcatttgaaaaagaagagcattgtgtttttt
gcaagctgtaaagaggttcagtatctgttcagagtgttctgtaagcttcagcctggtctt
cctgtcctggccctccatggcaagcagcagcagatgaagagaatggaagtctacacttgt
tttgttcggaaaaaggcagcagtgcttttcgctacagatatcgcagctcgtggcctggat
tttccagcagtgaattgggtcattcagtttgattgtccagaagatgcaaacacgtatatc
cacagagtgggaaggacagccaggtacaaagaaggtggtgaagctttgttggtattgctt
ccttcagaagaaaaagggatggtggaacagctggcacagaggaaagtacctatcagtgaa
atcaaaattaatcctgaaaaacttacagacattcagaagaggctgcaagcattcttagct
caagatcaggagttaaaagagaaagctcagaggtgttttgtatcctacttgcgttcagtt
tacttaatgaagaacaaggaagtatttgatgttttcaaattgcctctagcagaatatgct
ctgtctcttggtcttgcaatggcacctcgtgtgagattccttcaaagagttcggaagcag
ctgtgtgcgaatgaggtagccaatgggacagaccacctggaggagacagagcaaaatgag
aatgccctcaccttggtaaatgaggaaacagtggagaaacgtggaactaatttcagtgca
aaaacttcagttatcaaaacaaaggagaagcagagaagaaaagaagctgaggaatgttct
gtttccagtggaaatgctgaggatagtggtgagtctgaggatgaatccaaagaggtgtct
gaggaggaaaaagaagttcttgtacctaacaggggacccaagtcagactccatgcagttc
tttgaagatgatgacgatgatgatgatgatgaggacaatactgaaggtctagatttgctg
acagtgaaacaacgggatgtttttggtgtggaaactaaagataatccagcaccgaccaca
tcaaaattaaagatgaagaaaaaagcaactaagacccaagaagccaaaaaaatcttgaag
aagaaatttaaagttaacacaaaaatagtttttactgaagatggagagttagtgcagcag
tggccacctgtgcagaaatccagtttggcgcaggcagatgaggaagatgatgccagtggt
atcaacttagataaagcaaaagaaatcttgcgtgaagaagacaaatttgacaaagaagaa
tacaggaagaaagtaaaggaaaaacatagggagaagaggctaaaagaaaaagcagcaagg
agagaagccaggaataagaatgcacaggctgaagaggaaacagtggcctttcttgatcac
agtggaagtgaagaagagtttgatccaagcactcttccagatcctgataaatacaaagac
tctgatgcagagcaggattcagaaagtgaagacagctatagtgaacttgaggagaagact
ggaagaaagaagagaagctatagcaacagtgccacagcagaagaaatgccactgaaaaga
aaaaagatgcatttcagccaagaggaggacccctgtttgccgttagatactgggctttct
ctggcagaggatgaagagcttgtactgcatctgctcaacagtcacaactaa
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