Pyrgilauda ruficollis (rufous-necked snowfinch): 121364330
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Entry
121364330 CDS
T07608
Symbol
TRIM24
Name
(RefSeq) transcription intermediary factor 1-alpha
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pruf01001
]
121364330 (TRIM24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121364330 (TRIM24)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121364330 (TRIM24)
Protein kinases [BR:
pruf01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
121364330 (TRIM24)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121364330 (TRIM24)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
PHD-1st_NSD
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
121364330
NCBI-ProteinID:
XP_041343448
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MEEAAAALAAAAAAAAGGPCPADRPGAAAAALSGENEAESRQGPAERDGDAAPLNLLDTC
GVCGQPIQSRRPKLLPCLHSVCQRCLPQPDRYLMLPPVLTPAAAAALKEPLPAAPPFSPV
SSQGSPLHCTPIGVIRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNA
EAHGFCVECVEWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHKKEQ
LKLYCETCDKLTCRDCQLLEHKEHRYQFIEEAFQNQKVIIETLITKLMEKNKYIKYTGKQ
IHNRILEVNQNQKQVEQDIKVAIFTLMVEINKKGKALLHQLETLAKEHRMKLLQQQQEVA
GLSKQLEHVMNFSKWAVSSGSSTALLYSKRLITYRLRYLLRARCDPSPVTNNTIQFHCDP
SFWAQNIFNLGSLVIEDKETPPHMPKSPVIEANLQPPGSLSPNQLSKFPTQISLAQLRLQ
HMQQQVMAQRQQAQRRAGPVVLPNPRMPGAMQQPPASHQAPPRLIHFQNHSPKPNGSALP
AQQMRFPQNQNLPRPSVKPSPLQMAFLAQQAIKQWQISSGQASSTPSTASSSTSTPSSPT
VTSAAGCDWKNYGPPVIDLSSPVGSSYNLPSLPDIDCSGSMTLDNAVRKDGTVEQNQPKP
PSNRTVQSPNSSVPSPGLSGGISVTNVHPPIRSPSASSVGSRESSGSSSRPPGADSTHKV
PVVMLEPIRIKQESSASNENFDFPIVVVKEETEEESRPRNSILTSLLLDTSHNSSSEEAM
LRTDAPDSTDDQPGALQENTFPGKTAWMGSSHAGEGRKEDDPNEDWCAVCQNGGKLLCCE
KCPKVFHLSCHVPTLMSFPSGEWICTFCRDLSKPEVEYDCDKPAHSSEKRKLEDTMGLAP
IDRRKCERLLLYLYCHEMSPAFQDPVPPTVPDYYKIIKKPMDLSTIKKRLEVTNSFYNKP
EDFVADFRLIFQNCAEFNEPDSEVADAGMKLESYFEDLLRNLYPERKFPVQPNSQSEKDN
AEVTDDSDDDFVQPRKKRLKGEDRQLLK
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggcggcagcggcgttagcagctgcagcagcggctgcggcgggggggccgtgc
ccggcggaccgaccgggggcagcggcggcggcgctgagcggggagaacgaggccgagagc
cggcagggcccggcggagcgcgacggggacgcggccccgctcaacctgttggacacttgc
ggcgtgtgcgggcagcctatccagagccggcggcccaagctgctgccctgcctgcactcg
gtgtgccagcgctgcctgccgcagccggaccggtacctcatgctgccccccgtcctgacc
cccgcggccgccgccgccctcaaggagccgctgccggcggcacctcccttctcgcccgtc
tcttcgcaaggctcaccgctgcactgcacgcccatcggtgttatccgctgtccaatttgt
ggtcaggaatgtgcagagagacacatcatagataacttttttgtgaaggataccacagag
gttcccagtagcacagtagagaaatcaaatcaggtctgcacaagctgtgaagacaatgca
gaagctcatgggttttgtgtggaatgtgtagagtggttgtgcaagacctgcatcagagct
caccagagggttaaattcacaaaggatcatactgtgaggcagaaagaagaagtatctcca
gaggcagttggtgtgaccagtcagcgaccagtgttctgcccttaccacaaaaaggagcag
ctgaagttgtattgtgaaacctgtgacaagctgacctgccgagactgtcagttactagag
cacaaagagcacaggtaccagtttatagaagaagcttttcagaaccagaaagttatcatt
gaaacactaatcaccaagttgatggagaagaataagtacataaaatatacagggaaacag
atccataacagaattcttgaagtgaatcagaatcaaaagcaggtggaacaggatattaaa
gttgccatatttacactgatggtagaaataaataaaaagggaaaagctctgctgcatcag
ttggagactctggcaaaagagcacaggatgaaacttctgcagcaacaacaggaagtggca
ggtctctctaaacagctggaacatgtcatgaatttttccaaatgggcagtttccagtggg
agcagcacagcactgttgtacagtaaacgtttgattacatatcgactacggtatctcctc
cgagcaaggtgtgatccttccccagtgactaacaataccatccagttccactgtgatcct
agcttctgggctcagaatattttcaatctaggttctttagtaattgaagataaggaaact
ccaccacatatgcccaagagccctgtgattgaagcaaacttacagccaccaggcagttta
tctcccaaccagctctccaagttcccaacacagatcagcttagctcagctccgcctccag
cacatgcagcagcaggtcatggctcagagacagcaagctcagcgcagagcaggaccagta
gttctgccaaacccaagaatgccaggagccatgcaacaacctcctgcttctcatcaggca
cctccacgcttgattcattttcagaatcatagtcccaaacccaatggttcagctcttcct
gcacaacagatgagatttccccaaaatcagaacctaccaaggccatcagtgaagcctagc
ccattgcaaatggcattcttggcacagcaagctataaaacagtggcagattagtagtgga
caagcttcatccaccccttcaactgcaagcagctcaacatcgactccatccagccccaca
gtcaccagtgctgctgggtgtgattggaagaattatggtccccccgtgatagatctgagt
tccccagtgggcagctcctataatctgccatctctgcctgatattgattgttcaggaagc
atgacattggataatgctgtaaggaaggatggcactgtagagcagaatcagccaaaacct
ccttcaaacaggactgtgcagtcaccaaattcctcagtaccatcaccaggcctctcagga
ggaatcagtgtgacaaatgtacaccctccaattcgttcacccagtgcctccagtgttggg
agcagagagagttctggctcctccagcaggccaccaggagctgattctacacacaaagtc
cctgttgttatgttggagccgatcagaattaaacaggagtcaagtgcatcaaatgagaac
tttgatttcccaattgttgtagtgaaggaagagacggaggaggaatcccggcctcggaat
tccatacttacttccttgctgctggataccagtcacaattcctcttctgaggaagctatg
ctaagaacagatgcaccagacagcacagatgaccagccaggggcactgcaggagaacacg
ttccctgggaaaacagcttggatgggatcctcccatgctggcgagggcagaaaagaggat
gatccgaatgaagattggtgtgctgtatgtcaaaatggagggaagctcctttgctgtgag
aagtgtcccaaagtattccatctttcttgtcatgttcctacattgatgagctttccaagt
ggagagtggatttgtacattctgtcgggatttgtccaagccagaagttgaatatgactgt
gataaacctgctcacagctctgaaaaacgaaaattggaagacaccatgggtttggcaccc
atagaccgcaggaagtgtgaaagactgctgctatacctctactgtcatgaaatgagtcct
gcctttcaagatccagttcctcccacagtccctgattactacaaaataatcaagaagcct
atggacctgtcaaccatcaagaaaagacttgaagtgaccaattcattctacaataagcca
gaagattttgtggctgatttcagactgattttccaaaactgtgctgaatttaatgagcct
gattcagaagtggctgatgctggcatgaaacttgaatcctactttgaagatcttctaagg
aatctttatcctgagagaaagtttcctgtacagccaaacagccagagtgaaaaagataat
gcagaagttaccgatgactcagatgatgactttgtacagccccggaaaaaacgcctcaaa
ggagaagaccgtcaattgcttaaatga
DBGET
integrated database retrieval system
