Pyrgilauda ruficollis (rufous-necked snowfinch): 121364738
Help
Entry
121364738 CDS
T07608
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121364738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121364738
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
121364738
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
HECT type E3
121364738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
121364738
NCBI-ProteinID:
XP_041344161
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYSSYGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHDCEGSKPEPIGALAGQHIVHVACGESHSVALSDQGQLFSWGAGSDGQLGLTT
IEDAVTVPRLIKKLNQQTILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS
PQRVKSLDGIPLAQVAAGGAHSFALSLSGAVFGWGKNSSGQLGLSDERDRESPCHVKLLR
SQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVSQIA
CGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPVKGHWAAHNGQLSGKPDACK
YHIVKHIFSGGDQTFVLCSKYENSLPADDFRTINETRYTCLINDETIDVWRQKLLEKNSS
NSVNNVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMNSQHSILLE
QILKSFESFLIPQLSSSPPDVEAMRIYLILPEFPPFQDSKYYISLTLPLAMAILRLDTNP
SKVLDNWWSQVCPRYFLRLVDLYKGAVVYLLSGRKTLLIPVLFSSYITAALRLLEKLHKV
NQKVKHVEYDKFYIPEISSLVDIQEDYLMWFLHQAGMKVRPSIMQDAVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAINGANLQNVFMLLTLEPLLARSPFLVLHVRRSNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYPESNLLWFSDT
CFVEHNWFHLIGIICGLAIYNFTVVDLHFPLALYKKLLNVKPCLEDLKELSPTEGRSLQQ
LLDYPGEDVEETFCLNFTICRESYGVTEQKNLIEGGDKILVQKDNREEFVEAYVNYIFNL
SVQEWYTAFSTGFLKVCGGKVLELFQPTELRAMIVGNSNYNWEELEESAVYKGDYTATHP
TVRMFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMSSLRIIIQSTPSGEQYLPVAHTCYN
LLDLPKYSSKEILSARLVQAIDHYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgctatgctggggctactcgtcttatggacagcctgggataggtagcaacctccaggtc
atcattcctgaaccacaggtgtatgggttcatccacgatagaaatgtcaaggaggtggca
tgtggaggaaaccactctgtgttcctgctggaagatggggaggtgtatacctgtggcctg
aacaccaaaggtcaactggggcatgactgtgaaggaagcaagccagagccgatcggggcg
ctggccgggcagcacatcgtgcacgtggcctgtggcgagtcgcacagcgtggccctcagc
gaccagggccagctcttctcctggggcgccggcagcgacggacagctggggctcaccacc
atagaagatgcagtgacagtaccaaggttgataaagaaattgaaccaacagacgatactg
caggtttcctgtggaaattggcattgcctggctctggcagcagatggccagttcttcacg
tgggggcagaacagctatggtcagctgggcttgggcaaagaatgtccctcccaagccagt
ccacagcgtgtcaagtctctagatgggatccctttggctcaggttgctgcaggtggagcc
cacagttttgccctttctctctcaggagctgtgtttggctgggggaagaacagctcagga
cagctgggactaagtgatgaacgagaccgagagtcgccgtgtcacgtgaagctgttgcgc
tctcagaaggtggtttacatcagctgtggagaggagcacacagcagtcctgacaaagagt
ggaggggtgttcaccttcggtgcaggttcctgtgggcagctgggccacgactccatgaac
gatgaggtgaacccccgaagagttcttgagctcatgggcagtgaagtatcccagattgct
tgtggcagacatcacactttagcctttgtgccttcttcaggaatgatctatgcatttggc
tgtggaacaagaggccagctgggaacagggcacacttgcaatgtgaagtgcccctctcct
gtcaagggtcactgggcagctcacaatgggcaactctcagggaaacctgatgcctgtaaa
taccacattgttaaacatatcttctctggaggagaccaaacttttgtgctttgctccaaa
tatgagaattccttgcctgctgatgatttccggaccataaatgaaacacgttacacctgt
ttaataaatgatgaaactatagatgtctggaggcaaaagcttttagaaaagaacagttct
aattctgtcaataatgttgttcagatactgtcctcagctgcctgctggaatggaagcttc
ttggagaagaaaatcgatgaacattttaaaaccagtccaaagatcccagggattgatctg
aactccacgcgagtgctgtttgagaagctgatgaactctcagcactccattctcctagag
cagatactgaagagctttgaaagctttttgattcctcagctgtccagctctccaccagat
gttgaggcaatgaggatctatctgattctcccagaattcccaccattccaagactccaag
tattacatctctctgacccttcctctagcaatggctattttgcgcctggataccaacccc
agcaaagtgcttgataactggtggtctcaggtgtgcccaagatacttcctcaggcttgtg
gacctctataaaggtgcggtggtttacctcctcagtggaaggaagacactgctgatccca
gtcctgttcagcagctacattacagctgctctcaggcttctggagaaactccacaaggtg
aatcagaaggttaaacatgtggaatatgataagttttatatccctgagatttccagctta
gtggacattcaggaggattatctcatgtggtttttgcaccaggctggaatgaaagtaagg
ccgtcaatcatgcaggacgctgtgactctctgctcttaccctttcatctttgatgctcag
gctaagaccaagatgttacagacagatgcagaattacagatgcaggttgcaataaatggt
gcaaatttgcagaatgtcttcatgcttctcaccctggagcctctgctggccagaagccct
ttcctggtacttcatgttcgcaggagtaacttagttggtgatgctttaagggagttgagc
atccattcagacattgacttgaaaaaacctctcaaagtcatctttgatggtgaggaagct
gttgatgctggaggagtgacaaaggaatttttcctcctgttgttgaaagaactactcaac
cctatctatggcatgttcacttactacccagagtcaaacctgctgtggttttcagacacg
tgttttgtagaacacaactggtttcacttgattggcatcatatgtggtcttgcaatctac
aatttcacagtggtagaccttcactttcccttggctctgtacaaaaaactcttgaatgtg
aagccctgcctagaggatttgaaggagctgtcccctacagaaggaaggagtctccagcaa
cttttagattaccctggggaagatgtggaggagacattctgtttgaattttacaatctgc
agggagagctatggtgtgacagagcagaagaacctgattgaaggtggagataaaatcctg
gtgcagaaggacaacagggaagagtttgtcgaagcctacgtaaattacatcttcaacctc
tccgtccaagagtggtacacagccttttctactggcttcctgaaagtgtgtggtgggaag
gtcctggaactcttccagcccacggagctcagggccatgatagttggaaacagtaactac
aactgggaggaactggaggagagcgctgtctataagggagactacactgccacacaccca
actgtgagaatgttctgggagaccttccatgaatttcccttggaaaagaagaagaaattt
ctcttgttcctgacgggcagcgaccgcattcccatctatggcatgtccagcctgcgcatc
atcatccagtcgacgcccagcggggagcagtacctgcccgtggctcacacctgctacaac
ctgctggacctgcccaagtacagcagcaaggagatcctcagcgcccgcctcgtgcaggcc
atcgaccactacgagggcttcagcttggcctga
DBGET
integrated database retrieval system
