Pyrgilauda ruficollis (rufous-necked snowfinch): 121364903
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Entry
121364903 CDS
T07608
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03030
DNA replication
pruf03410
Base excision repair
pruf03420
Nucleotide excision repair
pruf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
121364903 (RFC5)
03410 Base excision repair
121364903 (RFC5)
03420 Nucleotide excision repair
121364903 (RFC5)
03430 Mismatch repair
121364903 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pruf03032
]
121364903 (RFC5)
03036 Chromosome and associated proteins [BR:
pruf03036
]
121364903 (RFC5)
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121364903 (RFC5)
DNA replication proteins [BR:
pruf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
121364903 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
121364903 (RFC5)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
121364903 (RFC5)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
121364903 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
121364903 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_16
AAA_24
AAA_22
AAA_11
AAA_assoc_2
DEAD
AAA_14
ResIII
RuvB_N
DUF815
AAA_5
AAA_30
AAA_19
PhoH
DNAX_ATPase_lid
AAA_7
TniB
TIP49
ATPase_2
nSTAND3
AAA_25
Gp44_lid
Mg_chelatase
Thioredoxin_6
bpMoxR
AAA_28
Hydantoinase_B
Motif
Other DBs
NCBI-GeneID:
121364903
NCBI-ProteinID:
XP_041344553
LinkDB
All DBs
Position
Unknown
AA seq
329 aa
AA seq
DB search
MAPAGSANLPWVEKYRPQALSELVSHRDILSTVQRFISEDRLPHLLLYGPPGTGKTSTIL
ACARQLYREREFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFKLVILDEADAMT
QDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLQHVIQ
EEGVDVTEDGMKALVTLSSGDMRRALNILQSTSMAFGKVTEENVYTCTGHPLKSDIANIL
DWMLNQDFSTAYRKIMELKTLKGLALQDILTEIHLFVHRVDFPPSIRIQLLIKLADIEYR
LAAGTSEKIQLSSLIAAFQVTRDLVVAEA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggcgggcagcgcgaacctgccgtgggtggagaagtaccgtccgcaggccctg
tccgagctggtgtctcaccgggacatcctcagcaccgtgcagcgcttcatcagcgaggac
cggctcccccatctgctcctctatgggccgcccgggacggggaagacatccaccattctg
gcctgtgcccggcagctctaccgggagcgggagttcggctccatggtcctggagctcaac
gcctctgatgaccggggcattgacatcgtgcgaggccccatcctgagctttgccagcacc
aggaccatctttaagaaaggcttcaagctggtcatcctggatgaagctgatgccatgacc
caggatgctcagaatgccctgaggagagtgatcgagaagttcacagaaaacacccgcttc
tgcctcatctgcaactacctctccaagatcattcccgccctgcagtcccgctgcacccgc
ttccgcttcggtcctctgaccccggagctgatggtgccgcggctccagcacgtcatccag
gaggagggggtggacgtgaccgaggacgggatgaaggctctggtgaccctctcaagcggg
gacatgcgcagggccctcaatatcttgcagagcacctccatggcctttgggaaggtgaca
gaggagaacgtttacacctgcacaggacatcccctcaagtctgacatcgcaaacatcctc
gactggatgctgaaccaggatttttccacagcctaccgcaaaatcatggagctgaagacg
ctgaagggcctggctctgcaggacatcctcactgaaatccatctcttcgtgcacagagtc
gacttccccccctccatccgcatccagctgctgatcaagctggcagacatcgagtaccgc
ctggccgctggcaccagcgagaagatccagctgagctccctcatcgccgcattccaggtc
accagggacctggtggtggctgaagcctga
DBGET
integrated database retrieval system
