Pyrgilauda ruficollis (rufous-necked snowfinch): 121365197
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Entry
121365197 CDS
T07608
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pruf03400
]
121365197 (GEN1)
DNA repair and recombination proteins [BR:
pruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
121365197 (GEN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
A2L_zn_ribbon
Motif
Other DBs
NCBI-GeneID:
121365197
NCBI-ProteinID:
XP_041345124
LinkDB
All DBs
Position
Unknown
AA seq
947 aa
AA seq
DB search
MGVTYLWQILEPVRQPVNMSSLRGKTLAVDLSLWVCEAQTVKKMVGVVTKPHLRNLFFRF
SFFTSMGIKLVFVMEGEAPRLKADTMSKRNEMRYGPSKKAGAVGTGRSLFKAMLKECLEL
LECLGVPWVQAAGEAEAMCAYLNAKGLVDGCITNDGDVFLYGAQTVYRNFAMNAKDPHLD
SYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQALKLIETLQGQNLLQRFEQ
WKEKFQYDDNPPLVVKRVIHCSQCHHPGSQKEHEHNGCKFCESVRCCKPSDSKHCPCAWH
RWERVKQANAVEDSIRKKAMSCEGFPFSEVIQEFLVNKNKSINIKECRRPNLLSFQLFAS
EKMEWTKHYACKKLLALLTRYDMIQRKSGYIDSKQLQAIRIVKTRVKNGIPCFEIEWQKP
EHYVDPEDEPVELFVVTVEEESLFQAAYPDVVALYQVEKPDILQKKQKKKKDRSEEKELP
NSYDEITNLLSQINLKPTNRILSVQHSMSDTKTTPEDQTQLRSTGSKDVALPSASCITTV
HVSASAAALADSSVPSQCTKYSGISSSSFVPAGLQLSRTDGKGTSFSTAPAHGGDDHDPA
ADLTTCIKYSHPLSHETVRNSSEYSDVTQSDMHSDSEDDVFSNDAMGQLQEWSLSERILK
KAPIPSQPLSEDAVQLESLNCFKQTKETLNPDRNHVSSSCQLNNLVQENKNVLSENSASE
SSVHIYQDAYKKADILAEMVQKDPSRSGSASLACRGQTPETFHPGCEMLPVSQKPADATG
CHIKETCIKTTWKASFKKSVCQNRCSSSEDSDDGHVDKILVYEQQKRQLNPGKFKKCFTK
KNSIVSSKRTKSDSVLTITGKKKMTDLKKAVNSFSVQEAPKPSSIEEVNCSQSPERPIGR
LGSDPTQQDRNAILTSAWADSPLPLSERLKGRIKINSVLHKIDNDSN
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgacttacctgtggcaaattcttgagcctgtgagacaacctgtcaacatgagc
agtctcagagggaaaacacttgctgttgatttaagtttgtgggtttgtgaagcacagacc
gttaaaaagatggttggagtagttaccaagccacatctcagaaacctattttttcggttc
tctttctttacatcaatgggaattaaactagtgtttgtcatggagggagaggcccccagg
ctgaaagcagacaccatgagcaagaggaatgagatgcgctatgggccttcgaagaaagct
ggagctgtaggaacagggagatctttatttaaagccatgttaaaagagtgtcttgaactg
ctggagtgtttaggtgtcccttgggttcaagcagctggagaagcagaggcaatgtgtgcc
tacctaaatgcaaaaggacttgttgatggctgcattaccaatgatggagatgttttcttg
tatggagctcaaacagtttataggaactttgccatgaatgctaaggatccacatcttgac
agttacacaatgtcctctattaaagagaaactcggttgtgacagagagtctttgattggg
ctagcagttcttctgggctgtgattatcttccaaagggtgttccaggagttgggaaggag
caagctttaaagttaattgagactctgcaaggtcaaaacttattgcaaaggtttgagcag
tggaaggaaaaatttcagtatgatgataatccacctttggttgttaaaagggtaattcat
tgttcacagtgccatcatccaggatctcagaaggaacacgagcacaatggatgtaaattc
tgtgaaagtgtgagatgctgcaaacccagtgactccaaacactgcccctgtgcatggcat
cggtgggagcgagtgaaacaagcaaatgcagtggaggacagtatcagaaaaaaagccatg
agttgtgagggctttccattttctgaggttatccaagagtttcttgtaaacaagaataaa
tcgatcaacataaaggaatgtcgaaggccaaatttattgtcctttcagctatttgcttca
gagaagatggaatggaccaaacattatgcttgtaagaagctgttagcacttttgacacgt
tatgatatgatccagagaaaatctggatacattgactcaaaacaactgcaggcaataagg
attgttaagacacgtgttaaaaatggaattccttgttttgaaattgaatggcaaaaacca
gaacattatgttgatccagaagatgagcctgtggagttgtttgtagtcacagtagaagaa
gagtctttgtttcaggctgcttatcctgatgttgttgccctctatcaagtggaaaagcca
gacattcttcagaagaaacagaaaaaaaagaaagacagatcagaagaaaaggaattacca
aattcttatgatgaaattaccaatcttctgtctcaaattaatttaaagcctacaaacaga
attctttctgtgcaacactccatgtcagatacaaaaacaaccccagaagatcagacacag
ctgagaagtactggatcaaaagatgtagcattgccttcagcttcctgcataacaacagtt
catgtgtcagcatcagcagctgctcttgctgactcatctgtgccctcacaatgcactaaa
tattcagggatatcatcctcttcctttgtaccagctggtctgcaactgagccgtactgat
gggaaaggaacctccttcagcactgcaccagcccatggaggtgatgaccatgacccagca
gctgacttaaccacctgcataaaatactcacatccactaagtcatgaaacagtaagaaat
agctcagaatattctgatgttacacagtctgatatgcattctgacagtgaagacgatgtg
ttctcaaatgatgctatgggacaacttcaggagtggtctttaagcgagcgaatacttaag
aaggctcccattccatcacagcctttgtctgaagatgcagtgcaactggagtctttgaat
tgttttaaacaaacaaaagaaacattgaatcctgatagaaatcatgtctcttcttcatgt
cagttaaataacctagtgcaggaaaataaaaatgttctatcagaaaactctgctagtgaa
tccagcgtacatatctatcaagatgcatacaaaaaagctgacatcctggctgaaatggtg
caaaaagacccttccagaagtggttcagcatctctcgcctgcaggggtcaaacaccagag
acgtttcatcctgggtgtgaaatgctgccagtgtctcaaaagccagcagatgcaactggc
tgtcacattaaagaaacttgtattaaaactacttggaaagcttcttttaagaagagtgtc
tgtcagaacagatgctcttctagtgaagacagtgatgatgggcacgtggataaaatcctg
gtttatgagcagcagaaaaggcaactgaaccctggcaagtttaaaaaatgttttacaaag
aaaaatagcattgtttctagcaaaaggacaaagagtgactcagtccttacaattacgggg
aagaagaaaatgactgatttaaagaaagctgttaacagtttctcagtgcaagaagctcca
aaaccatcctccatagaagaagttaattgttcccaaagtccagaacgaccaattggaaga
ttgggttctgatcccacacagcaagacagaaatgctattctgacttctgcgtgggcagac
agtccccttcctctgtctgaaagactgaaaggaagaatcaaaatcaattcagttctccat
aaaatagataatgatagcaattaa
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