Pyrgilauda ruficollis (rufous-necked snowfinch): 121365209
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Entry
121365209 CDS
T07608
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
KO
K11988
sonic hedgehog
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
121365209 (SHH)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pruf01002
]
121365209 (SHH)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
pruf00536
]
121365209 (SHH)
Peptidases and inhibitors [BR:
pruf01002
]
Cysteine peptidases
Family C46: hedgehog family
121365209 (SHH)
Glycosaminoglycan binding proteins [BR:
pruf00536
]
Heparan sulfate / Heparin
Morphogens
121365209 (SHH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Vint
Motif
Other DBs
NCBI-GeneID:
121365209
NCBI-ProteinID:
XP_041345135
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MDEMLLLTRILLVGFICALLVSSGLTCGPGRGIGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKITRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEKGGTKLVKDLRPGDRVLVADTEGRLLYSD
FLTFLDREDGSHKLFYVIETRQPRARLLLTAAHLLFVAPQQNQSQAGTASSRALFASRVR
PGQRIFVLGEGGQQLLPAAVHRVSLREEASGAYAPLTAQGTILIDRVLASCYAVIEEHSW
AHWAFAPFRLLQAVLAALCPSGAGSPMEDPTAPGIHWYSRLLYRIGSWVLDSDSLHPLGM
MVSSS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaatgctgctgttgacaagaattctcttggtgggcttcatctgcgctctttta
gtctcctctgggctgacttgtggaccaggcaggggcattggaaaaaggagacaccccaaa
aagctgacccctttagcctataagcagtttattcccaatgtggcagagaagaccctaggg
gccagtggaagatatgaagggaagatcacaagaaactccgagagatttaaagaactaacc
ccaaattacaaccctgacattatttttaaggatgaagagaacacgggagctgacagactg
atgactcagcgctgcaaggacaagctgaacgctctggcgatctcggtgatgaaccagtgg
cccggggtaaagctgcgggtaaccgagggctgggacgaggacggccaccactccgaggag
tccctgcactacgagggccgcgccgtggacatcaccacctcggaccgggaccgcagcaag
tacggcatgctggcccgcctggccgtcgaggctggcttcgactgggtctactacgagtcc
aaggcgcacatccactgctccgtcaaagcagaaaactcagtggcggccaaatctgggggt
tgcttccctggctcggccacggtgcacctggagaaaggcgggaccaagctggtgaaggac
ctgaggcctggagacagggtgctcgtggccgacacggaaggccgtctgctctacagcgac
ttcctcaccttcctcgaccgcgaggacggctcccacaagctcttctacgtcatcgagact
cggcagccccgggcccggctgctgctgacggccgcccaccttctcttcgtggccccccag
cagaaccagtctcaggcgggcaccgccagcagccgggcgctgttcgccagccgcgtgcgg
ccgggccagcgcatcttcgtgctgggcgagggcgggcagcagctgctgccggcggccgtg
caccgcgtgtcgctgcgggaggaggcgtcgggcgcctacgcgccgctcaccgcgcagggc
accatcctcatcgaccgcgtgctggcctcgtgctacgccgtcatcgaggagcacagctgg
gcgcactgggccttcgctcccttccgcctgctccaggccgtgctggccgccctctgtccc
tccggggcggggtccccgatggaagatcccacggcccccggcatccactggtactctcgg
ctcctctaccgcatcggcagctgggtgctggatagtgactctctgcacccgctgggcatg
atggtgtcatccagctga
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