Pyrgilauda ruficollis (rufous-necked snowfinch): 121365299
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Entry
121365299 CDS
T07608
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121365299 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pruf04131
]
121365299 (NRXN1)
Membrane trafficking [BR:
pruf04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
121365299 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
121365299
NCBI-ProteinID:
XP_041345293
LinkDB
All DBs
Position
Unknown
AA seq
1473 aa
AA seq
DB search
MGAVLVRRGGCLLLWLALLLGCWAELGSGLEFPGAEGQWTRFPKWNACCESEMSFNMKTR
SSSGLVLYFDDEGFCDFLELILTQGGRLQLSFSIFCAEPATLLSDTAVNDNLWHAVVIRR
HFKNTTLIIDRAEAKWVEVKSKRRDMTVFSGLFLGGLPPELRSATLKLTLSSVKDREPFK
GWITDVRVNYTQASPVESQEVRLDDEQSRLCARDDVCLNGGVCSVLNDQAVCDCSQTGFR
GKDCSEGLAHLMMGDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQR
NGLMLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLR
QVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN
NDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSIS
FDFRTTEPNGLILFSHGKPRHQKDAKHPQMVKVDFFAIEMLDGHLYLLLDMGSGTIKIKA
LQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDDLYLGGLPENKAGL
VFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEIQSTAGVKPSCSRETAKPCLSNPC
KNNGVCRDGWNRYVCDCSGTGYLGRSCEREATILSYDGSMFMKIQLPVVMHTEAEDVSLR
FRSQRAYGILMATTSRESADTLRLELDAGRVKLTVNLGKGPETLFAGYNLNDNEWHTVRV
VRRGKGLKLMVDDQQAVTGQMAGDHTRLEFHNIETGIITERRYLSSVPSNFIGHLQSLTF
NGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKASYVALATLQAYTSMHLFFQFK
TTSLDGLILFNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLNDNQWHNVMIS
RDTNNLHTVKIDTKITTQSTAGARNLDLKSDLYIGGVAKEMFKSLPKLVHAKEGFQGCLA
SVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCANQGVCLQQWDGFSCDCSMTSF
SGPLCNDPGTTYIFSKGGGQITYTWPPNDRPSTRADRLAIGFSTVQKEAVLVRVDSSTGL
GDYLELHIHQGKIGVKFNVGTDDIAIEEMNAIINDGKYHVVRFTRSGGNATLQVDNWPVI
ERYPAGNNDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNSQATIKIGGKERGHPFQ
GQLSGLYYNGLKVLNMAAENDANIMIEGNVRLVGEVPSSMTTESTATAMQSEMSTSVMET
TTTLATSTARRGKAPTKEPIGQTTDDILVASAECPSDDEDIDPCEPSSGGLANPTRAGGG
REYPGSSEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYHVDESRNYISN
SAQSNGAVIKEKQPNSAKSSNKNKKNKDKEYYV
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgggggcggtgctggtgcggcgcgggggctgcctgctgctctggctggccctactgctg
ggctgctgggctgagctgggcagcgggctggagttcccgggtgcggagggccagtggacc
cgcttccccaagtggaacgcctgctgcgagagcgaaatgagcttcaacatgaagacacgc
agctccagcgggctggtgctctactttgatgacgagggtttctgtgacttcctggagctc
atcctcacccagggagggcggctacagctcagcttctccatcttctgtgccgagcctgcc
accttgctctcggacacggcggtcaacgacaacctctggcacgctgttgtcatccgccgc
cacttcaagaacacgacgctgatcattgaccgagccgaggccaagtgggtggaggtgaag
tccaaacggcgggacatgactgtcttcagcgggctcttcctaggagggctcccgccggag
ctgcggtcggcgacactaaagctgacgctctcctccgtcaaggaccgggagcccttcaag
ggctggataacagacgtgcgggtgaactacacgcaggcgtcgccggtggagagccaggag
gtgcggctggatgacgagcagagccggctgtgcgccagggacgacgtctgcctcaacggg
ggcgtctgctcggtgctcaacgaccaggccgtctgcgactgctcccaaacgggcttccga
gggaaggactgcagtgaaggtctggcgcacctgatgatgggcgaccaaggtaaaagtaaa
ggaaaagaagaatatattgcaacattcaagggatcagagtacttctgctatgatctatct
cagaaccccatacagagcagcagtgatgaaataactctgtcgtttaaaacgctgcagagg
aacggactgatgcttcacacgggaaaatcagccgattatgtcaatcttgcactgaaaaat
ggagctgtctccttggtcattaatttgggctcaggggcctttgaagcgctggtggaacct
gtgaatgggaaatttaatgacaatgcctggcatgatgtgaaagtaaccaggaatctgcgt
caggtgacaatatcagtggatggaattctgaccacaacgggatacacgcaagaagactac
accatgctgggctctgatgactttttctatgttggaggcagtcctagtacagcagacctc
ccagggtcaccagtcagtaacaactttatgggctgtctcaaagaggttgtatataaaaat
aacgatgtcaggttggagctgtctcgacttgccaagcaaggggatcctaaaatgaagatt
catggggttgtagcatttaaatgtgagaatgttgcaaccttagatccaatcacatttgaa
acaccagagtctttcatctctctgccaaagtggaatgccaagaaaacaggctcaatatca
tttgactttcgcacaactgagccaaatggcctgattcttttcagtcatgggaaaccaagg
caccaaaaagatgccaaacatccacagatggtgaaggttgatttttttgctattgagatg
cttgatggccacctctacctactattagacatgggatcaggtactataaaaataaaagcc
ttgcagaagaaggtgaatgatggtgaatggtaccatgtggattttcagcgggatgggcgg
tcagggacgatatctgtgaacacgttacgtactccatacactgcaccaggggaaagtgaa
atccttgacttggatgatgacttgtatcttggaggcttaccagaaaataaagcaggcctg
gtcttcccaacagaagtgtggacagcactcctcaattatggatacgtcggctgcattcgg
gatttatttattgatggtcaaagcaaagatattcgacagatggctgaaattcaaagcaca
gctggagtaaaaccctcatgctcaagagaaactgcaaagccttgccttagcaacccctgt
aaaaacaatggtgtgtgcagggatgggtggaacagatatgtgtgtgattgctctggcacg
gggtaccttggcagatcgtgcgaaagagaggcaacaattttaagctatgatggaagtatg
tttatgaaaatccagcttcctgttgtgatgcacacagaggcagaagatgtttctttaagg
ttcaggtcccagcgagcttatggcattttaatggcgacgacttccagggaatctgcagat
acccttcggttagagctggatgcaggacgagttaagctaacggtcaacctaggcaaaggc
ccagaaaccctttttgctggctataacctcaatgataatgagtggcacacagtgcgtgtg
gtgcggcgaggaaaaggtttaaagttaatggtggatgaccagcaggctgtgacaggtcaa
atggctggcgatcacacacggctggaattccacaacatagaaacaggaataataacagaa
cggcgctatctgtcttctgtgccttccaattttattgggcatctacagagtctcacattt
aatggcatggcatacattgacttatgtaaaaatggagacatcgattattgtgagctaaat
gcaagattcgggttcaggaacatcatagcagaccctgtaacctttaaaacaaaagcaagt
tatgttgcactggccacgctacaagcgtacacatctatgcacctttttttccagttcaaa
accacctccctggatggattgatactttttaacagtggcgatggaaatgatttcattgtg
gttgaattagtaaaagggtatttacactatgtgtttgacttgggaaatggtgccaacctc
atcaagggaagttctaataaacctctgaatgacaaccagtggcataatgtcatgatatca
agggataccaacaacctgcacactgtaaagattgacactaaaatcacaacacagagcaca
gcaggagccagaaatttagatctaaaaagtgatttgtatattggaggagtggccaaagaa
atgtttaaatccttgcccaagctggtgcatgcgaaggagggattccaaggctgccttgca
tcagttgacttgaacggacgcctccctgacctcatctcagatgctctcttctgcaatgga
caaatagaaagaggatgtgaaggccccagcacaacgtgccaagaggattcctgtgccaac
cagggcgtgtgcctccagcagtgggacgggttcagctgtgactgcagcatgacctccttt
agtggaccgttatgcaatgacccggggacaacgtatatctttagcaaaggtggtggacaa
atcacttacacgtggcctcccaacgaccggccgagcactcgagcagacagactggcaata
gggtttagcactgtgcaaaaagaggctgtgctggtgcgagtggacagttctactggcctt
ggagattatttagagctgcatattcaccagggaaaaattggagtcaaatttaatgttggg
acggatgacatcgccatcgaagagatgaacgccatcattaacgatgggaagtaccacgtg
gtgcgcttcacaaggagcggtggcaatgccaccctacaggtggacaactggcccgtcatc
gagcgttacccagcaggaaacaatgataacgagcgcctggcgattgctagacagcgaatt
ccatatcgacttggtcgagtagttgatgaatggctactcgacaaagggcgtcagctcaca
atcttcaatagccaagcaaccataaaaattggaggcaaggaacgtggccaccctttccaa
ggccagctctctggtctttactacaatggcttgaaagttctgaatatggcagcagaaaat
gatgccaacatcatgatagaaggaaatgtgagacttgttggtgaagtgccttcctctatg
acaaccgagtccacagccaccgcgatgcagtcggagatgtccacgtcagtcatggaaacc
accaccaccttggccaccagcaccgccagaagaggaaaggctccgaccaaagaacccatt
ggtcagactacagatgacatcctggtggcctcggctgaatgtcccagcgatgatgaggac
atcgatccctgtgagccgagctcaggtgggttagcaaaccccaccagggcaggaggagga
agggagtaccccggctcgtccgaggtgatccgtgaatccagcagcacgacgggcatggtg
gttgggatcgtggcagcggcggcgctgtgcatcctcatcctcctgtatgccatgtacaag
tacaggaatcgagacgaagggtcctaccatgtggatgagagtcgaaactacatcagtaac
tcagcacaatccaacggggctgtgatcaaggagaaacagcccaacagcgctaaaagttcc
aacaaaaacaagaaaaataaggataaggagtactatgtctga
DBGET
integrated database retrieval system
