KEGG   Pyrgilauda ruficollis (rufous-necked snowfinch): 121365320
Entry
121365320         CDS       T07608                                 
Symbol
WDR43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pruf  Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pruf00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    121365320 (WDR43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pruf03009]
    121365320 (WDR43)
Ribosome biogenesis [BR:pruf03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    121365320 (WDR43)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Utp12 WD40 Beta-prop_THOC3 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_SPT8 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_IFT122_1st EIF3I Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR41 Beta-prop_DCAF4 Beta-prop_RIG_1st WD40_like DUF6235 UTP15_C Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 121365320
NCBI-ProteinID: XP_041345352
LinkDB
Position
Unknown
AA seq 650 aa
MAAPPCAFSPRGCRLFASAGPDGRLRVWDTAGSRLQHEYVPSAHLSAACTCLAWAPAGAR
QPPSKDGPQRKKRKSEVGEVDKQLDILAIGTAVGSILLYSTVKGELQSKLDGGHDSRVNC
VRWHQDSSCLYSCSDDKHIVEWNTQTCKVKCKWKGDNSSVTCLCISPDGKMLLSAGRTIK
LWDLETKEVYRHFTGHATSVSSLMFTTVKPTNDSKPFDGITGLYFLSGAIHDRLLSVWQI
RSDRKEKNAVMSFTVTDEPTFVDLTVSEVKEEPVKLAVVCRDGQLHLFEHILNGYCKKPL
TSNCTVQIATPGNDGDSTPKPVPILAAAFCTDKQSLLLVYGNALQPIIEKVSLNTSESHI
CLVRDIQKVLSLKTDAAVTKVKTPVVNSDAKVLVPGIPGHSTGVKTPALGKEKKKNKRKP
GETEESIEERLGALDIDVSKVKTPGGLPQTDSFAVLLVQGLESNDAEILNKVLNTRKENI
VKNTVARMPIHAVIPLLHELTKRLQGNPYSASLMVRWLKSVFTLHASYLSTLPDLIPQLG
MLYQLMESRVKTLQKLSRLHGRLFILVTQVAASQTVQDVPEVNQTAKLVYEDDSSEEEGS
DDEMIADKDSDENWDEDEEKEEQSDEQDMTVEKEINGDSDLEPENESEEE
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcggcccctccgtgcgccttctccccccgcgggtgccgcctgttcgcctcggccggg
cccgatgggcggctgcgcgtgtgggacacggccggcagccgcctgcagcacgagtacgtg
ccctccgcccacctcagcgccgcctgtacctgcctggcctgggccccggcgggtgcgcgg
cagccccccagcaaggatggccctcagaggaaaaaacggaagtctgaagttggagaagtg
gacaagcagttagatatcctggctattggtacagcagttggtagcattttgttgtacagc
acagtaaaaggagaattacagagcaagctagatggtggtcatgacagtagagtaaactgt
gtgagatggcatcaagacagctcctgcttgtatagctgttcagatgacaaacacattgtg
gaatggaacacacagacctgcaaagtaaagtgtaagtggaaaggcgacaatagcagtgtc
acctgtctatgcatcagtccagatggaaaaatgctgctgtcagctggtagaactataaaa
ctgtgggacttggagaccaaagaagtctacagacatttcacaggccatgctacatcagtg
tcatcattaatgtttaccacagtgaaacctacaaatgacagtaaaccctttgatggaatt
acaggactttatttcttgtctggagctatacacgaccgattattgagtgtgtggcagatc
aggtcagataggaaagaaaagaatgctgtgatgtctttcacagtaacagatgaaccaact
tttgtggacctgactgtatcagaagtcaaagaagagcctgtgaagttagcagttgtgtgc
agagatgggcagttgcatttatttgaacatatcttgaatggttattgcaaaaagccctta
acatcaaactgtactgttcagatagcaacacctgggaatgatggggactccacgccgaaa
ccagtccctattctagcagctgcattttgcacagacaaacagtctctgctgctggtgtat
ggaaacgccttacagcccatcatagagaaagtgtctttgaacaccagtgaatcccacata
tgtttggtacgggacatccagaaagtgttgtcacttaaaacagatgctgctgtaacaaag
gtaaagacacctgttgtgaactcggacgccaaagttctagtacctggcattccaggacat
agtacaggtgtcaaaactccagctttgggaaaggagaaaaagaaaaacaagaggaaacca
ggagagacagaggagagcatcgaggagcgccttggggcattggatattgatgtcagcaaa
gtcaaaactcctggtggccttccccaaacagacagctttgctgtgctgctggttcagggc
ttggaaagcaacgatgcagaaatcttaaataaagtgcttaacacaagaaaagaaaatata
gtaaagaacacagtagccagaatgcctatacatgctgtcattccactgctgcatgagctt
acaaagagattgcaaggcaacccatacagtgcctcactaatggttcgatggctgaagtct
gtttttaccctacatgcatcctacctttccacattgccagaccttattcctcagctggga
atgttataccagttgatggagagcagagtaaaaactctgcaaaagctttcccgtctgcat
ggaagactcttcattcttgtcacccaggttgcagcatcacaaacagttcaggatgtacct
gaggtcaatcagactgcaaagctggtctatgaggatgactcctcagaggaggaaggctca
gatgatgagatgattgcagataaagactctgacgaaaactgggatgaagatgaagaaaaa
gaggagcaatctgatgaacaagacatgactgttgaaaaggaaatcaatggtgattctgat
ttggaaccagaaaatgaaagtgaagaagagtaa

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