Pyrgilauda ruficollis (rufous-necked snowfinch): 121365367
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Entry
121365367 CDS
T07608
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121365367 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pruf03019
]
121365367 (TTC37)
Messenger RNA biogenesis [BR:
pruf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
121365367 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_1
TPR_2
TPR_14
TPR_16
TPR_11
TPR_8
TPR_12
TPR_17
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_6
ARM_TT21_C
TPR_15
Fis1_TPR_C
TPR_5
BTAD
TPR_30
ChrB_N
TolB_N
Retrotran_gag_2
FlbT
TPR_20
Motif
Other DBs
NCBI-GeneID:
121365367
NCBI-ProteinID:
XP_041345424
LinkDB
All DBs
Position
Unknown
AA seq
1580 aa
AA seq
DB search
MSRVAAEVAGAAVAAAATMSNKEVKAALKSARDAIRNKQYKEALKHCKAVLKQEKNNYNA
WVFIGLAAAELEQPDQAKGAYKKAIELEPDQLLAWQGLANLYEKPNQTDVKGDLADVYQK
LLELYESGDKQKWCDVCNKLVELYHQEKKYLEVAETWQKLIRMKQEDGAEKAELHQLWKK
MIQLLKDSTRNQDNKTGQLLLTAFEHALDSADTVPGEDHQNLYKDFIQCLSKFPHEVARL
EKTCHDMMALYPTMTYPLEVLCLHFVQSGTLSEKALHCFSRLLEIDASSGPGIIGFGIKC
LKENKYKEAVKSLTEGLQKTNQCPAAWYYLAEAQMRIHEHRNAVLSCNQALEALGTPEGP
NLQWKNLAFQLKAETLIKIADADAADEAIKALEQIVDGSGDPVISALRGRAYLNKGLMDQ
ASKVSQELLLSHPDLAEASALEGFIHYSQKNYEQAEKSFLNAIERKAGTAEYHQYLGLTY
WFMGDETKKDKGKALTQFLKAAKLDSYLGSAFCYLGNYYRDIAGDKSRARGCYKKAFELD
ETDEESGTAAVSLSVELGDMDTALSILNEVTEKARPGTAKWAWLHRGLYYLRTGQPSQAV
ADLQAALRADPKDSNCWESLGEAYFNRGSYSTALKSFRKASELNPGLVYSIYRAAALEQI
LGKYENAIATYQQILKKTEDYVPALKGLGECYLMLARSALHNYLDRKAVDYIEQALAYFT
RAVKHRPDVSCLWKLLGDTCTSVHVISPTKVNVQVPGSLLSKNATKQVLKKNELLILGGR
CYGRALKLMSLPSIWCDLGINYYRQAEHLTAVGTDMNEISELLEKSLQCLKKAVRLDSKN
HLYWNALGVVASCSAIGNYALAQHSFIKSVQAEQINVVAWTNLGVLYLATGNIEQAHEAF
KVAQSLEPSYLLCWIGQALIAETVGSYDTMDLFRHTTELSMHTEGAKGYAHWVCSTLQDK
ANRNTELYLYNIVQMNAIPAAQVVLGKYTERNPDDASAFTMFGFLNEYLHLKQQAAYAYG
RAASLLKTSEDTEKYNTAMQNYGRSLCALGRCDEAIEVYTSIPLTEFDGIVGLALAYFKK
GLLEESIKAYEKALSVAESEKDKAHILTALAIIQYKLNKVDAAKTLLFKCSLKEPSTESL
KALCTLGLVKQDATLATAALKELLKHEKGDDGIYERCLIASAVYALQGRNVAIQREVSKA
IHSYPDNPALWSLLSRLVPLYASKKPKGGAVAGSVAHTLDVNCGKEVLLNIAVNQLVAGC
HMLEDKKSNPLKNIQKAIHVCPDNPVAWAVLMAACHAENTVVCLNNTEPKRTGLEMTLVS
TVSAKTGESNLPQNYVRTLEDWCLCQAITSLGETGKLSEAEALCNKGLKSCPEHPALFLL
LRQVQCKQLLQSHKELPDNILEELRKTVMSSSSSAAAWQWLAKIYQSQRMMTGAEMCYRK
SLQLASQQGNWSGKLSSLLRLAMLALEICMANVSNEHWPSLVQEATTEALKLSPCPLAAL
LQALLQYNRKMGARETRRMLERVVYQPANPETIVSVARWYLLQHLYAKDDCELIDVLIEN
AKANGDVRALELNEKLSASA
NT seq
4743 nt
NT seq
+upstream
nt +downstream
nt
atgagccgggtggcggctgaggtggcgggcgcggcggtggctgcagcagccacaatgtca
aataaggaggtgaaggcagcattgaagagtgctagagatgcaataagaaataaacagtat
aaggaggccttaaaacattgcaaggcagtcttgaagcaagaaaaaaataactacaatgct
tgggtattcattggcctggcagctgctgagttagagcagcctgatcaggccaaaggagca
tacaagaaggctattgaacttgaaccagaccaactactggcatggcagggattagcaaat
ttgtatgagaaacccaaccaaacagatgtcaaaggagacttagcagatgtttaccaaaaa
ctcttggaactttatgaaagtggtgacaagcagaaatggtgtgatgtatgtaacaagctt
gtggaactataccatcaagaaaagaaatatttagaggtggctgaaacttggcagaaacta
ataaggatgaaacaggaggacggtgcagaaaaggcagaacttcatcagctttggaagaag
atgatccagttactgaaagacagtaccaggaaccaggacaataagactgggcagttgctt
ttgactgcatttgagcatgcgctggactctgctgacactgttcctggtgaagaccaccaa
aatctttacaaagacttcatacagtgcttgtccaaatttcctcatgaagtagctaggttg
gaaaagacctgtcatgatatgatggctttgtaccctactatgacttaccctttggaagta
ctctgcttgcactttgttcagtcaggtactttgtcggaaaaggccctgcactgtttctct
agacttttggagatagatgcaagcagcggtccaggcatcattggatttggtataaaatgc
ctcaaagaaaataaatacaaggaggctgttaagagtcttactgaaggtttgcagaagact
aaccagtgtccagcagcatggtattatctagcagaggcacagatgagaatccatgaacac
aggaacgctgtcttgtcctgcaatcaagctcttgaagctcttggaactcctgagggtcct
aatcttcagtggaagaaccttgcctttcagctgaaagcagagactttgattaaaatagct
gatgctgatgctgcagacgaagccattaaagcacttgagcagattgtagatggaagcggt
gatccagtgatttcagctctcaggggtcgggcttatctaaacaaaggtttaatggatcaa
gcttcaaaggtttcacaagagcttctcttgtcccaccctgatctggctgaggcctctgct
ctagagggtttcatccattattcccaaaagaactatgagcaggcagaaaaaagttttcta
aatgctattgaaagaaaggctggaactgcagagtatcatcagtacctggggctcacatac
tggttcatgggcgatgagacaaaaaaagacaaaggaaaagcactcactcagttcttgaag
gctgcaaaattggacagctacttgggaagtgccttttgttatctaggtaactactacaga
gacattgctggagacaaaagcagagctcgtggttgctataaaaaggcttttgaactggat
gagacagatgaagaatctggaacagcagctgtcagcttaagtgtggaacttggagacatg
gatactgctctgtcaatcctgaatgaggtaactgaaaaagcaagacctggtacagcaaaa
tgggcctggcttcatcgtggactttactacttgagaactggtcaaccgtcacaagcagtg
gctgatttgcaggcagctctcagggctgatccaaaggattccaactgctgggagtctcta
ggggaggcttacttcaacagaggaagctactcaacagctctgaaatccttcaggaaagca
agtgagctgaacccagggcttgtgtacagcatttacagagctgcagcacttgagcagatt
ctaggcaaatatgaaaatgctatagctacctatcaacaaatattaaagaagacagaagac
tatgtgcctgcactgaaaggacttggtgagtgttatctcatgctggcaagatcagccctt
cataactatttggataggaaggctgtagattacatagagcaggcccttgcatattttaca
agggcagtaaagcaccgtcctgatgtatcttgcctctggaaactgttaggagatacctgt
actagtgtgcatgttatttcaccaaccaaagtgaatgttcaagtaccaggatcccttctg
agtaaaaatgcaaccaaacaggtgctgaagaaaaatgagcttctcatactgggaggaagg
tgttatggcagagctttaaaactgatgtctttgccaagcatatggtgtgatcttggaata
aattattatcgccaagcagagcatctcacagcagtgggcactgacatgaatgagatcagt
gaactgttagagaagtctttgcagtgcctcaaaaaagctgtgagacttgacagcaaaaat
catctttattggaatgcacttggagtagttgcttcttgtagtgctattgggaattatgct
cttgcacaacattcgttcatcaaatctgttcaagctgagcaaattaatgttgttgcctgg
accaacttgggggttttgtatctggcaactggaaacattgagcaagctcatgaagccttc
aaggtagcccagtctctggaaccttcttacttgttgtgttggatcggacaggctcttatt
gcagagactgtaggcagctatgataccatggatctcttcaggcacacaactgaactcagt
atgcatactgagggagcgaaaggctatgcccactgggtgtgttcaacgctgcaggataaa
gccaacagaaacactgaactgtatctgtacaacattgttcaaatgaatgctataccagca
gcccaagtggtcttgggcaaatatacagaaagaaatccagatgatgcttctgctttcaca
atgtttgggtttttgaatgagtatctgcatctaaaacagcaggcagcctatgcctatggg
agggcagcttcgctgctgaaaacctcagaggatactgagaaatacaatacagcaatgcaa
aactatggcaggtcactgtgtgctcttgggcggtgtgatgaggccattgaagtttacaca
tcaatacccctaacagagtttgatggcattgtggggctagcgttagcttacttcaagaaa
ggactcttagaagaaagtatcaaagcctatgaaaaagccttgtctgttgctgagtctgaa
aaagataaagcacatatcctgactgccttggcaataatacaatataaactgaacaaagtg
gatgctgcaaagacactgctgtttaaatgttcattaaaggaacctagtactgaaagtctg
aaggctttgtgcacgctgggattggtaaagcaggatgcaacacttgcaacagcagcccta
aaagaattactgaagcatgaaaaaggggatgatgggatttatgagaggtgtcttattgca
tctgctgtttatgcattacaaggtagaaatgtggcaatccagagggaagtctccaaagca
atacacagttaccctgataatcctgccctttggtctcttctgtctcgactagttccactg
tatgcatcaaaaaagccaaaaggaggagctgtggccggaagtgtggcacatacacttgat
gtaaactgtggaaaggaagtcctgctgaatattgcagttaatcagttggtagcaggatgt
cacatgttagaagataagaaaagcaatcctctgaaaaatattcagaaggccatccatgtc
tgtccagataatcctgttgcttgggcagtgctaatggcagcttgtcatgctgaaaacact
gttgtctgtctaaacaacactgaaccgaaacgaacaggcctagagatgacacttgtgtct
acagtttcagccaaaactggagaaagtaatcttccgcaaaattatgtccgtactcttgaa
gactggtgtctgtgtcaagctattaccagtctaggggagaccggtaaactgtcagaagct
gaagctctttgtaacaagggtttaaaaagctgccctgagcacccagctctgtttttgctt
ttgagacaagttcagtgtaagcagctgttgcagtctcacaaagaacttccagacaacatc
ctggaggaacttcgcaagacagttatgtccagttcatcctcagctgcagcctggcaatgg
ctggcaaaaatatatcagtctcagagaatgatgactggagcagagatgtgttataggaag
agtctgcagttggcatcacagcagggcaactggagtgggaagttatccagccttctcagg
ctagctatgctcgcactggaaatctgcatggctaatgtctccaatgaacactggccatcc
ttggttcaggaggcaacaactgaagctttgaaactttctccttgccctttggcagctctg
cttcaagccctgctacagtataatcgcaaaatgggagcacgggagactcggcgaatgttg
gagagagttgtttaccaaccagcaaatccagagaccatagtgtcagtggcacgctggtac
ctcctgcaacatctgtatgccaaagatgattgtgaattaatagatgtgcttatagaaaat
gccaaagctaatggagatgttagagctctggaactaaatgagaaattgtcagcaagtgcc
tag
DBGET
integrated database retrieval system
