Pyrgilauda ruficollis (rufous-necked snowfinch): 121365510
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Entry
121365510 CDS
T07608
Symbol
SIN3A
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121365510 (SIN3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pruf03036
]
121365510 (SIN3A)
Chromosome and associated proteins [BR:
pruf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
121365510 (SIN3A)
REST complex
121365510 (SIN3A)
Heterochromatin formation proteins
Other heterochromatin formation proteins
121365510 (SIN3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
121365510
NCBI-ProteinID:
XP_041345684
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MKRRLDEQESPVYASQQRRITSSTEAFPHQHRVLAPAPPVYEAVSETMQSATGIQYSVTP
SYQVSAVPQSSGSHGPAIAAVHSGHHHPAPVQPHGSQVVQSHTHPTPPAVPVQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDMVNVTTPGQVHQIPTHGLQPQPQPQPPHPSQPSAQSTPTPAQ
PAPQPTPAKISKSLCSPQPSQLQAHTPASQQTPPIPPYASPRSPPVQPHTPVTISLGTTP
SLQNNQPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALT
EQEVYAQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKVESVRNDHGGTVKKPQLN
NKQQRPNQNGCQIRRHSGTGATPPVKKKPKLLGLKDQSLAEASKHGVGTESLFFEKVRKA
LRSTEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFTWFKNFLGYKESVHMETY
PKERATEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSE
DSTFVSSKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAIQKKLSRLSAEEQAKFRL
DNTLGGTSEVIHRKALQRIYADKAADIIDGLRKNPSVAVPIVLKRLKMKEEEWREAQRGF
NKVWREQNEKYYLKSLDHQGINFKQNDTKVLRSKSLLNEIESIYDERQEQASEDNAGVPT
GPHLSLAYEDKQILEDAASLIIHHVKRQTGIQKEDKYKIKQIMYHFIPDLLFAQRGELSD
VEEEEEEEMDVDEATGAAKKHNGVGGSPPKTKLMFNNTTAQKLRGMDEVYNLFYVNSNWY
IFMRLHQILCLRLLRICTQAERQIEEETREREWEREVLGIKRDKSDSPAIQLRLKEPMDI
DVEDYYPAFLDMVRNLLDGNMDSSQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVS
DEICVQVTDLYLSENSNGATGGLLASQSSRTLLEAAYQRKAEQLMSEENCFKLMFIQSRG
QVQLTIELLDTEEENSDDPVEAERWCDYVERYVNSDSTSPELREHLAQKPVFLPRNLRRI
RKCQRGREQQEKEGKEGNSKKSMENIESLDKVECKFKLNSYKMVYVIKSEDYMYRRTALL
RAQQSHERVSKRLHQRFQAWVDKWTKEHVPREMAAETNKWLMGEGLEGLVPCTTTCDTET
LHFVSINKYRVKYGTIFKTP
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgattggatgagcaggagtcacccgtgtatgcgtcgcagcagagacgtatc
accagcagcaccgaagctttcccgcaccagcaccgcgtgctcgccccggccccgccggtc
tatgaggcggtttccgagaccatgcagtcagccacggggatccagtactctgtaactccc
agctaccaggtgtcggcagtgccgcagagctcgggcagccacggcccggccatcgccgcc
gtgcacagcggccaccaccaccccgcgcccgtgcagccccacggcagccaggtggtgcag
agccacacgcaccccacgcccccagccgtgcccgtgcagggccagcagcagttccagagg
ctcaaggtggaggatgcattgtcttaccttgaccaggtgaagctacagtttggtagtcag
ccacaggtctacaatgacttcttggatattatgaaggaatttaaatctcaaagcatcgac
accccgggggtgatcagccgtgtgtcgcagctcttcaagggccaccctgacttgatcatg
ggcttcaacaccttcctgccacctggctacaagattgaggtgcagaccaatgacatggtg
aacgtgaccaccccggggcaggttcaccagatccccacccacgggctgcagccccagccg
cagccgcagccgccgcatccgtcgcagccttcggcgcagtccaccccgacaccagcacag
ccggcaccacagcccacacctgccaaaatcagcaagagcctgtgttctcctcagccatcg
cagttgcaggctcacactcctgccagccagcagacgcccccgatcccgccgtacgcgtcg
ccgcgctcgccgccggtgcagccgcacacgcccgtgacaatctctctgggcaccacacca
tccctgcagaacaatcagcctgtggagttcaaccacgccatcaactatgtcaacaagatc
aaaaatcggttccagggacagccagacatctacaaagctttcctggagattctccatacg
tatcagaaagagcagcgtaatgccaaggaggcaggagggaactacacgccagccctgaca
gagcaggaggtctatgcccaggtggctcgtctcttcaagaaccaggaggatctgctctcg
gaatttgggcagttcctgcctgatgccaacagctctgtgctgttgagtaagacaactgca
gagaaagtggaatcggtcaggaatgaccacgggggcacggtgaagaagccacagctcaac
aacaagcagcagagacccaaccagaacggctgccagatccgacggcactcgggcaccgga
gcaacccctccggtgaagaagaaaccaaagctgcttggtttgaaagaccagtctttggca
gaagccagcaaacatggtgtggggacagaatctctcttcttcgagaaggtccgcaaagct
ctgcgtagcacagaggcgtacgagaacttcctgcgctgcctggtgatcttcaaccaggag
gtgatctcccgggccgagctcgtgcagctggtctctccattcctggggaaattcccagaa
ctgttcacttggtttaaaaactttctgggatacaaggagtctgttcacatggagacatat
ccaaaggaacgggctactgaggggattgccatggagattgactatgcctcctgcaagagg
ctgggctccagctacagagccttgcccaagagctaccagcagcccaagtgcacggggagg
actccactgtgtaaagaggttttgaatgacacctgggtctccttcccgtcctggtctgaa
gattccacatttgtgagctccaagaagacccaatatgaagagcacatctacaggtgtgag
gacgagcgttttgagctggatgttgtcttggagaccaacctggcaaccatccgcgttctg
gaggcaatccagaagaagctgtcacgcttgtctgcggaggagcaggccaaattccggctg
gacaatactctggggggcacctcggaggtgatccaccgcaaggctctgcagaggatatac
gctgacaaagcggcggacatcatcgacgggcttcgcaagaacccctctgtggctgttccc
atcgtgctgaaaaggttaaagatgaaagaggaagagtggcgagaagcccagagaggattt
aataaagtctggcgagagcagaatgagaagtattacctgaaatccttggaccaccagggc
atcaacttcaagcagaatgataccaaggtcctaaggtcaaagagtctcctcaatgagatt
gaaagcatctatgatgagaggcaagagcaggcttcagaagacaatgctggagtccccaca
ggcccacacctctcactcgcctatgaagacaagcagatcctggaagatgctgcctctctc
atcatccaccacgtgaagcggcagacgggaatccagaaagaggacaagtacaaaatcaag
cagatcatgtatcacttcattccagacctgctgtttgctcagcgaggtgaactctcagat
gtggaagaggaagaagaagaggaaatggatgtggacgaagctactggggctgcaaaaaag
cacaacggtgttgggggtagtcctcccaaaaccaagctgatgttcaacaacacgacagcc
cagaagctgcggggcatggatgaggtctacaacctcttctacgtgaacagcaactggtac
atcttcatgaggctgcaccagatcctgtgcttgcggctgctgcggatctgcacccaggcc
gagcggcagatcgaggaggagacgcgggaacgggagtgggagagggaagtgctgggcatc
aagcgagacaagagtgacagtcctgccatccagctgcgactgaaggagcccatggacatc
gatgttgaggattactacccggccttcctggacatggtgcgcaacctgctggacgggaac
atggactcgtcgcagtacgaggactcgctgcgcgagatgttcaccatccacgcctacatc
gccttcaccatggacaagctgatccagagcatcgtccgacagctgcagcacatcgtgagc
gatgagatctgtgtgcaggtgacagacctgtacctctcagagaacagcaacggagccacg
ggagggctcctggcgtcccagtcctcgcgcacgctcctggaggccgcctaccagcgcaaa
gccgagcagctcatgtccgaggagaactgcttcaagctgatgttcattcagagcagaggt
caagttcagttaaccattgagctgctggacacagaagaggaaaactcggatgaccctgtg
gaagcagagcgctggtgtgactacgtggagcggtacgtcaactctgattctacctccccc
gagctccgcgagcacctggcccagaaacccgtcttcctgcccaggaatctgaggcggatc
cgcaagtgtcagcgtggtcgggagcagcaggagaaagaagggaaggagggaaacagtaag
aagtccatggagaacatagagagcctggacaaggtggagtgtaaattcaagctgaactcc
tataagatggtgtacgtgatcaaatcagaggattacatgtacaggaggaccgcgctgctg
cgagcccagcagtcccacgaaagggtgagcaagcggctgcaccagcggttccaggcctgg
gtggacaaatggaccaaggagcatgtgccccgcgaaatggcagccgagacaaacaagtgg
ctcatgggtgaaggcttggagggcttggtgccctgcaccaccacgtgtgacacagagacc
ctgcactttgtcagcatcaacaagtaccgcgtcaaatatggcacgatattcaagacaccc
tag
DBGET
integrated database retrieval system
