Pyrgilauda ruficollis (rufous-necked snowfinch): 121365857
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Entry
121365857 CDS
T07608
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pruf04121
]
121365857 (RBBP6)
Enzymes [BR:
pruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121365857 (RBBP6)
Ubiquitin system [BR:
pruf04121
]
Ubiquitin ligases (E3)
U-box type E3
121365857 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
121365857
NCBI-ProteinID:
XP_041346301
LinkDB
All DBs
Position
Unknown
AA seq
1819 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLSDLKRQIMGREKLKAADCDLQITNAQTKEEYTDD
SALIPKNSSVIVRRIPIGGVKATSKTYVMTPKSHKILETTFRSRSEPVSGTSKAIDDSSA
SISLAQLTKTANLAEANASEEDKIKAMMTQSGHEYDPVNYMKKPVGPPPPSYTCFRCGKP
GHYIKNCPTNGDKNFESVPRIKKSTGIPRSFMMEVKDPNTKGAMLTNTGKYAIPTIDAEA
YAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTA
LLESEEHTCPTCHQTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKIQQQQQQQQQQLP
PPPPPPPPPLMRQTITRTLQPLMRPAMARQQDPLMIPLASLASRSALSSLGPGPSMAAGL
PVNPSSVVVSDLPPAVSLSLRGEKPDGPFRDADAVLPPALMTAAELSKSSPLSISSLLEE
KGYQVPVLRQPAIPSLLGPQGQSIPTTGHPMRAGALRRPGWELSNRGRPHSDRAQRTQAP
SLPASAPVFVPVPPPPLYPPPPHALPLPPGVPPPQFPPQFPPGQPPSAGYTVPPPGYPPA
PANMSSAWVPTAVPAAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAK
ELMEYKKIQKERRRSFSSHLPWLELEGCAGRFWDTCLTVWIPQACLSKSPYSASSYSRSS
YTYSKSRSGSSRSRSYSRSFSRSHSRSYSRSPPYQRRGKGKSRNYRSRSRSHGYHRSRSR
SPPYRRYHSRSRSPVFRGQSPTKRTVPQSEAEREYFNRYREVPPYDMKAYYGRSVDFRDP
FEKERYREWERNYREWYEKFYKGYAVGAQPRPPVNRENFSPERFGPPGTRRENSPYARGR
REEYPAGQSHRNRNVAGNYPEKPGRESHGVKDPTKSKEKEVENPLGDGKGNKHKKHRKRR
KGDENEGFPNVELLEGARKPREPVPTEDAKTDSLFMLPSRDDATPVRDEPMEADSIAFKP
VSEKEKKEKDKPKAKVEKTKRKVEVAAAPKKDSVAKPAKASQEKVDPDREKSPRAEPPVK
KVKEELPKTDSVKTSSSQKDEKGLGTPRKAHPKVTKDHPETRPAKEEKAKKDHPKEAKAE
KPSSKEEKSKKPAEKSKLSDAKLEKRKRKAEEKADKEHEAASAKAYKPETAESKTSPKGK
AEPEGEKGERTPEKDKAAFLNNPSKKIKLNRETGKKIVSGENVPPGKEAVEKPEPSSSKV
KAEKTKGKARRKVTAADGASSTLVDYTSTSSTGGSPVRKPEEKPDTKRTVIKTLEEYNND
ITAPAEDVIIMIQVPQSKWDKDDFESEEEDIKSTTQVPPTIGKPASVIKPVSAKAPNPLK
HTEKETEPLEKIQKAAKEASYESTQHDAKSSKSSVSSEKGKTKDRDHSLSDKDSSEKRKS
SVQPEKEHSERTAEQGNGKTASQSSKDGRSSEKHDSGRGSAAKDFTPNRDKKSDHDGSRE
HSSSKRRDEKSESARRKDSPSRIRDSTAVQKSKPREERVEPPKKGPAEAKRSSYSPPRER
KPAEHKAVHDPKRPAEEHKPPDKNPGKEKDKEKEKEKHVQEVKSNKEKEPGGNKPPVKQD
SPEVKVEKEKESVAAQSDKGAAKPKPPASSAARLSSDLTRETDEAAFVPDYNESDSESNV
SAKDEEAAGKTPKEAKEKAVEKVKEEAAAPAPAEQPEAGRSQSQSSPSVSRSRSHSPSES
QTRSHSSSASSGESQDSKKKKKKKEKKKHKKHKKHKKHKKHVGNETELEKSQKHKHKKKK
SKKSKDKEKDDQKVKSVTT
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgcgtgcattacaagttctcctccaagctcaactatgacacggtcaccttcgac
gggctgcacatctccctgagcgacctcaagcgccagatcatgggccgggagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcgcagaccaaagaagaatacaccgatgat
agtgctctgattcccaagaactcatcggtgattgtgaggagaattcccattggaggagtt
aaagctaccagcaaaacatacgttatgactcctaaatcgcacaaaatcctagaaactact
ttcagaagtcgaagtgagccagtgagtggaacatcaaaagcaattgatgactcttctgca
tctatttctctggcccagcttactaagactgccaatctggctgaagccaatgcttccgag
gaggataaaataaaagctatgatgacacagtctggccatgaatatgatccagtcaattac
atgaagaaacccgtggggccacctccaccctcctacacctgttttcgctgtggcaaacct
gggcactacataaagaactgtccaacgaatggggacaaaaacttcgagtctgttcccaga
attaaaaaaagcacaggaattccaagaagttttatgatggaggtgaaggaccccaacaca
aagggtgccatgctgaccaacactgggaaatatgcaattccaaccatagatgcggaagct
tatgctataggaaagaaggagaagcctcccttcctacctgaggagccatcctcctcctca
gaagaagatgatcctattccagatgagctgttgtgtctcatttgtaaggatataatgacg
gatgcggttgttattccctgctgtggaaacagttactgtgatgaatgtattagaacagca
ctgctggagtccgaggagcacacatgccctacctgccatcagacagatgtttctcctgat
gctttaattgccaataagtttctgcgccaggccgtcaacaacttcaaaaatgaaaccggt
tacacaaaaaggctccgtaagattcagcagcagcagcagcagcaacagcagcagctgccg
ccgccgccaccgccgccgccgccgcccctgatgcggcagacgatcacgcgcaccctgcag
ccgctgatgcggccggccatggcccggcagcaggacccgctcatgatcccgctggcctcc
ctggcctcccgctccgccctctcctccctgggccccgggccgtccatggcagctgggctg
ccggtcaatccgtcttctgtggttgtctccgatctccctccagcagtgtccctctctctc
cgtggggaaaagccagatggaccttttcgtgatgccgatgctgttttgcctcctgctctg
atgactgctgctgagctttccaaatcttcccctttgtcaatcagcagtttgttggaagag
aagggctatcaggttcctgtactgagacaaccagcgataccaagtcttctgggccctcaa
ggacaatcaatacctacaactggtcatccaatgagagctggtgcgcttcgcaggccaggc
tgggagctttcaaatcgaggacgcccgcacagtgaccgtgcccaaaggactcaggcccca
tcactgccagcatcagcaccagtctttgtgcctgtgcctccacctcccttgtatcctcca
ccaccccatgctcttcctcttcctccgggggtaccaccaccacagtttcctcctcagttt
ccacctgggcagcctccatccgctgggtacactgtcccccctcccggatatcccccagct
cctgcaaacatgtcatcagcttgggtcccaacagcagtgccagcggctcattcaaacacc
atcccaacgacacaagcacctcctctctctagggaggagttttacagagagcaacggagg
cttaaagaggaggaaaagaaaaagtccaaacttgatgagtttacaaatgattttgctaag
gaattgatggaatataaaaagattcaaaaggagcgtaggcgttcgttttccagtcacttg
ccttggttagagctggagggatgtgcaggacgtttttgggacacctgcctgacagtgtgg
attccacaggcctgtctgtccaagtctccctatagtgcttcatcttactctagaagctca
tacacctactccaagtcacgctcaggttcgtcgcgctcccgctcctactcgcgctccttc
agccgctcccattcccgctcctactcgcggtcgccgccctatcagagacgaggcaaaggg
aagagtcggaactaccgctcccgctcccgctcccacggctatcaccgctcccgctcccgc
tcgcccccgtacaggcgctaccactcccgctccaggtctccggtgttccggggccagtcc
cccaccaaacggacggtcccgcagagcgaggccgagcgcgagtacttcaaccgctaccga
gaggtgcccccgtacgacatgaaggcttactatggccgctcggtggacttcagagacccc
tttgagaaggagagatacagagagtgggagaggaactacagagagtggtacgagaagttt
tacaagggctatgccgtgggcgctcagccacggcctccggtgaacagagagaacttctct
ccagagcggtttggcccacctgggaccagacgagagaattcaccgtatgctcggggacgg
agggaggagtatcctgctgggcagagccacaggaatcgtaatgtagctggaaactaccct
gaaaagcctgggagagagagccatggcgtcaaagatcctacaaaatcaaaagagaaggag
gtggaaaatccactgggagatggcaaaggcaataaacataaaaaacaccggaagagaaga
aaaggggatgagaatgaaggatttcccaatgttgagctgttagaaggagcaagaaaacca
agagagccagttccaacagaagatgctaaaacagactctctattcatgctgccaagcagg
gatgatgccacccctgtaagggatgagcccatggaagcggattccattgctttcaagcca
gtgtctgaaaaggagaaaaaagagaaggataagccaaaagcaaaggttgagaaaacaaag
cggaaagtagaagtggcggctgctccaaagaaagacagcgtagcaaaaccagctaaagct
tcccaggaaaaggtggaccccgatcgcgaaaaatctcctcgagcggaacctcctgtgaaa
aaggtcaaggaagagctgccaaagacagacagtgttaaaacctcttcctctcagaaggat
gagaagggtcttggtacaccacggaaggctcatcccaaagtgacaaaggatcacccagaa
accagaccagccaaggaggagaaggcaaagaaagaccatcctaaagaagccaaggcagag
aagccctccagcaaggaggagaagtcaaagaaacctgctgagaaaagcaaactttcagat
gccaaacttgagaaaaggaaaagaaaagcagaggaaaaggctgataaagaacatgaggcc
gcttctgcaaaggcctataaacccgaaactgcagaatcgaaaacatcacccaaggggaag
gctgagcccgagggggagaaaggagagcggaccccggaaaaggataaagctgcttttctt
aacaacccgtccaaaaagattaaacttaaccgagaaactggaaaaaagattgtgagcgga
gaaaacgtgccacctggaaaagaagctgtggagaaacctgagcccagcagcagcaaagtt
aaagcagaaaagacaaagggaaaagcaaggaggaaagtgacggcagctgatggcgctagc
tcgactcttgtggattacaccagcacgagttccactgggggaagccctgtcaggaagcct
gaggagaagccagacaccaaacgaactgtcattaagaccctggaggagtataacaacgac
ataacagcccctgctgaggatgtcattatcatgatccaggtccctcagtccaagtgggat
aaagatgactttgagtctgaagaggaagacatcaaatccaccacccaggtgcccccaact
ataggaaaacccgccagtgttatcaaacctgtgagtgcaaaggcaccaaaccccctcaaa
cacactgaaaaggagacagaacctctggagaaaatacagaaagctgcaaaagaggcaagt
tatgaaagcacccaacacgatgccaagagttcaaaaagttccgtgtcgagtgaaaaaggt
aaaaccaaagaccgggatcattctttgtcagacaaggacagttctgagaagaggaagagc
agtgttcagccagaaaaagagcactcagaacgcacagctgagcaaggaaatggaaaaact
gcatctcagtcttctaaagatggcagatcttcagagaagcacgacagtggccgtggctcc
gctgcgaaggacttcactcccaaccgagacaagaagtccgaccatgatggcagcagggag
cactcgagttccaagcgcagagatgagaagagcgaatcagcacggaggaaagactcccca
tcccggatcagagactccacagcagtgcagaagagcaaaccaagagaggagcgcgtggag
ccgcccaagaagggccctgcggaggccaagcggagcagctacagccccccgcgggagcgc
aagcccgccgagcacaaagctgtgcacgaccccaagcgccccgccgaggagcacaaaccc
ccggataaaaacccgggcaaggagaaggacaaggagaaggagaaggagaagcatgtacaa
gaagtgaagagcaataaggagaaagagccaggtgggaataaaccaccagtgaaacaggac
tcgccagaagttaaagtggagaaggagaaggagagcgtggcggctcagagcgataaaggc
gcggcgaagcccaagccgccggcgagcagcgccgcgcgcctctcgtccgacctcacccgc
gagaccgacgaggccgccttcgtgccggactacaacgagagcgacagcgagagcaacgtg
tctgcaaaggacgaggaggctgcagggaaaacgcccaaagaggcgaaggaaaaggctgtg
gagaaggtgaaagaggaggcggcggccccggctcccgccgagcagccagaggcgggcagg
agccagagccagagcagccccagcgtcagccgcagccgcagccacagcccctccgagagc
cagacacggagccacagcagcagtgccagctcaggggagagtcaggacagcaagaaaaag
aaaaagaagaaagagaagaagaagcacaagaaacataagaaacataagaagcataagaaa
cacgtgggaaatgaaacagaattggaaaagagccaaaaacacaaacacaagaagaaaaaa
tcgaagaagagcaaagataaagagaaagacgaccaaaaagtgaaatctgtcacgacataa
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integrated database retrieval system
