Pyrgilauda ruficollis (rufous-necked snowfinch): 121365972
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Entry
121365972 CDS
T07608
Symbol
PDLIM2
Name
(RefSeq) PDZ and LIM domain protein 2 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
pruf
Pyrgilauda ruficollis (rufous-necked snowfinch)
Pathway
pruf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pruf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
121365972 (PDLIM2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
121365972 (PDLIM2)
Domain-containing proteins not elsewhere classified [BR:
pruf04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
121365972 (PDLIM2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
DUF4749
LIM
PDZ_6
PDZ_2
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
121365972
NCBI-ProteinID:
XP_041346544
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MEKGCRTRRGGAGTGEGVQGWRRGSGLSGGLGLVPSGCGGRRAGSPRCPGMLSTAGHGEG
VWVWGLLPALEAQPRKFFRAASQAPLCALGIFNIPGGCGRGALCRTGCPVPDGLPSSPRL
WRDGWDGIWCGFRRCGCTSPPILSEPSAVPLTGVPRGPCATPGGSSASFTSVDLLWGEGL
GLLGVGRCCGEQQNPSLAATSSPPNPTVSALPGHSAGLAAKASPISCLAPAPGNDLGCLS
CTAGCLGPPGPGEEAASLGGQEEAVVAADTLRGPGSPPRKESAAGAGDPQGAAGTGRPSL
CGLAAAAMPVTVTVTLPGPAPWGFRISGGRDFGKPITVSKVTEHGKAATGDLRPGDVIVT
INGESTAEMLNVEAQNKIRQSPGQLRLDVERSPVPSLSHTNGDTLPEMLASHFQDTLQMP
SESRSALRTLDPSLASLTHPPGSASSQPLEQEFTCPGLPQERRLSRQSSSQGAVLPPPPR
PPSPELGAPQNPWATPRERRLSSPCPSTWPSQGSEPAMRRLEEDSEVYKMLQENRELRAA
PRQSSTFRLLQEALEDEEGGGPAAPFPSRLSAGARKPVAGVQKLHVCEKCGSSIATQAVR
IQDGRYRHPSCYTCADCGLSLKMRGHFWVGDELFCEKHARLRYQGPPGGPVPRPVSPRS
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggggtgcaggacacggaggggaggtgcagggactggagaaggggtgcaggga
tggagaagaggttcagggctgtcggggggtctagggttggtgcccagtgggtgtgggggt
cgccgggctggcagccctcgctgcccagggatgttgagcacggctgggcatggggagggg
gtttgggtttggggtttgctcccggcgctagaagcccagcccaggaaattcttccgggca
gcctctcaagcccctctttgtgctcttgggatttttaacattcccggcggctgcggacgg
ggtgccctgtgccggacggggtgcccggttccagatgggctgcccagctctcccaggctg
tggcgggatgggtgggatgggatctggtgtggatttaggagatgcggctgcacatcccca
cccatcctatctgaaccaagcgctgtgccgctcaccggggtgccacggggaccctgtgcc
acccccgggggatcctcagcgtcctttaccagtgtggatttgctgtggggtgaaggactg
gggctgcttggtgtcggacgctgctgtggtgagcagcagaacccgtccctcgctgccaca
tcctcccctccaaaccccactgtctcagctctgccaggccacagcgccggccttgctgcc
aaggcgtcaccgatttcctgccttgctccagctcctgggaacgaccttggctgtctcagc
tgcaccgccgggtgcctgggaccccccggcccgggggaggaagccgccagcctcggggga
caggaggaagcggtggtggctgctgacaccctgcgaggacctgggtcccctccccggaag
gaaagcgctgccggcgctggggaccctcagggtgcagcggggacagggaggccctcgttg
tgtggtctagccgccgctgccatgccggtgacggtgacagtgacactgcccggcccggcc
ccgtggggcttccgcatctccgggggaagagatttcgggaagcccatcaccgtctccaag
gtgacggagcacgggaaggcggccacgggtgacctccggccgggagatgtcattgtcacc
atcaatggggagagcacggctgagatgctcaacgtggaggcgcagaacaagatcaggcag
agcccggggcagctgcggctggacgtggagaggtcccctgtgccatctctcagccacacc
aacggggacaccttgccagagatgttggcctcgcatttccaggacacgctgcagatgcca
agtgagagccgaagtgccctgaggaccctcgaccccagcctggcatctctcacccaccca
cctggcagtgccagctcacagcccttggagcaggagttcacctgtcccggcctcccccag
gagcgacgcctgagccgccagagcagctcccagggggccgtcctgcctccccccccgcgc
ccaccctcaccggagctcggagccccccaaaacccctgggcaaccccccgggagaggcgc
ctctcctccccctgtcccagcacctggcccagccagggctcggagccggccatgaggcgc
ttggaggaggactcggaggtctacaagatgctgcaggagaaccgggagctgcgggcggcc
ccgcggcaatccagcaccttccgcctgctccaggaggcgctggaggatgaggaaggagga
ggccccgcagcccccttccccagccggctctcggccggggcccgcaagcccgtggccggg
gtgcagaagctgcacgtctgtgagaagtgcgggagcagcatcgcgacacaggcggtgcgg
atccaggacggtcgctaccggcacccgtcctgctacacctgcgccgactgcggcctcagc
ctgaagatgcgcggccacttctgggtgggggacgagctgttctgcgagaaacacgcccgc
ctgcgctaccagggacccccgggggggcccgtgccccgtcccgtgtccccccgctcctga
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