Planktothrix rubescens: PCC7821_00693
Help
Entry
PCC7821_00693 CDS
T09709
Symbol
rnc1
Name
(GenBank) Ribonuclease 3 1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
prun
Planktothrix rubescens
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PCC7821_00693 (rnc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prun03019
]
PCC7821_00693 (rnc1)
03009 Ribosome biogenesis [BR:
prun03009
]
PCC7821_00693 (rnc1)
03036 Chromosome and associated proteins [BR:
prun03036
]
PCC7821_00693 (rnc1)
Enzymes [BR:
prun01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
PCC7821_00693 (rnc1)
Messenger RNA biogenesis [BR:
prun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PCC7821_00693 (rnc1)
Ribosome biogenesis [BR:
prun03009
]
Eukaryotic type
90S particles
RNase
PCC7821_00693 (rnc1)
Prokaryotic type
rRNA processing factors
PCC7821_00693 (rnc1)
Chromosome and associated proteins [BR:
prun03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
PCC7821_00693 (rnc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
DND1_DSRM
PTS_EIIB
Motif
Other DBs
NCBI-ProteinID:
CAD5921637
LinkDB
All DBs
Position
I:complement(711139..711837)
Genome browser
AA seq
232 aa
AA seq
DB search
MTKLPEIKNEQLRLQALTHRSYLNEHPNAGEDNERLEFLGDAVLGFLVGELLFKKRYPED
MTKMSEANMTRLRSVLVDEKQLAKFAVQFNLGELLRLGKGAIRDGGRTNPSLLSDAFEAY
IGAYYLDTNIDAVREFIHPLFSAVANEMVFPQSETTPQTLIDCKNRFQQWALEKSGENPK
YYVIGESGPDHAKEFCIEVRVRDKVYGYGKGKRKQDGEKKAAEVALQKLGLL
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaattaccagagatcaaaaacgaacaattgcgattacaagcattaacccatcgc
tcctatttgaatgaacatcctaacgctggagaagacaatgaaagattagaatttttaggg
gatgccgtcctaggatttttagtgggagaattgctatttaaaaagcgctatcccgaagat
atgactaaaatgagtgaggcaaatatgacccgtttacggtctgtgttggttgatgaaaaa
caactagctaaatttgcagtacaatttaatttaggggagttattacggttaggaaaaggg
gcaattcgagacggtggacgcaccaacccttccttacttagtgatgcctttgaagcctat
attggggcctattatttagataccaatattgacgctgtgcgagagttcatacatccgtta
ttttctgctgttgcgaatgaaatggtatttccccagtcggaaaccacccctcaaactttg
attgattgtaaaaaccgctttcaacaatgggcgttagaaaaatctggtgaaaacccgaaa
tattatgtgatcggagaatctgggccagatcatgctaaggaattttgtattgaagttcgg
gttagggataaggtatatggctatggaaaagggaagcgaaaacaggatggggaaaaaaaa
gccgccgaagtggcgctgcaaaaattgggtctattgtag
DBGET
integrated database retrieval system
