Planktothrix rubescens: PCC7821_01734
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Entry
PCC7821_01734 CDS
T09709
Symbol
udg
Name
(GenBank) Type-4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prun
Planktothrix rubescens
Pathway
prun03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PCC7821_01734 (udg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prun03400
]
PCC7821_01734 (udg)
Enzymes [BR:
prun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PCC7821_01734 (udg)
DNA repair and recombination proteins [BR:
prun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PCC7821_01734 (udg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAD5938280
LinkDB
All DBs
Position
I:complement(1854904..1855593)
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AA seq
229 aa
AA seq
DB search
MSDHEQLSLFDFKNTEPAAPLINLNRDLIPTDAKIAIPLGTYQTLEEIANHCNHCYRCEL
GQNRTHAVIGRGNIQAPIMIIGEAPGQNEDEQGLPFVGRSGQLLEKILESVGLTTDKEVY
ISNAIRCRPPNNRTPTPQEIEACKPYLLEQIRLVNPKIILLTGATAVKSLLGDKRGISKI
RGQWMEWEGRLCMPIFHPAYLLRNPSKEQGSPKWLMWQDIQEVYNKLHE
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcacgaacaattgagtttatttgattttaaaaatactgaacctgctgctccg
ttaataaatttgaatcgggatttaattccgactgatgctaaaattgcgattcctttagga
acttatcaaaccttagaagaaattgctaaccattgtaatcattgttatcgttgtgaatta
gggcaaaatcgtacccatgcggtcattggtagaggtaatattcaagcgccaattatgatt
atcggagaagcaccggggcaaaatgaagatgaacagggtttaccctttgttggcaggtcg
ggacaactgttagaaaaaattttagaatccgtgggtttaactacggataaagaggtttat
atttctaatgccattcgctgtcgtccgccgaataatcgcactcctaccccgcaagaaatc
gaagcctgtaaaccctatttattagaacaaattcgtttagttaatccaaaaattatttta
ttaaccggagcaacggcggttaaatctttattaggagataaacgaggaattagtaaaatt
agagggcaatggatggagtgggaagggcgattatgtatgccaatttttcacccagcttat
ttattaagaaatccctctaaggaacagggatcaccgaaatggttaatgtggcaagatatt
caggaagtttacaataaattgcatgaataa
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