Planktothrix rubescens: PCC7821_01856
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Entry
PCC7821_01856 CDS
T09709
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prun
Planktothrix rubescens
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prun03016
]
PCC7821_01856 (truB)
Enzymes [BR:
prun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PCC7821_01856 (truB)
Transfer RNA biogenesis [BR:
prun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PCC7821_01856 (truB)
Prokaryotic type
PCC7821_01856 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Channel_Tsx
DKCLD
UPF0113
Motif
Other DBs
NCBI-ProteinID:
CAD5940221
LinkDB
All DBs
Position
I:complement(1993899..1994792)
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AA seq
297 aa
AA seq
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MYGFINLNKSAGFTSHDCVARVRRILRLKRVGHAGTLDPAATGVLPMALGKATRLLQFLP
SHKAYHARIKFGVTTTTDDLEGETLTVQSVPHLQLEQIQEILPQFIGKIEQVPPIYSAIH
VQGKRLYDLARKGEIIEVPSRIVEVFELKILNWYPGEFPELEIAIACGSGTYIRSIARDL
GAILNTGATLANLIRTESSGFGLENSLTLETLETQVQQQIFLPLSPNIALNHLTKIILNY
ESTKRWFQGQSIIVENQIIEDRPVSVYDQNQQLLGIGKLIETPEQILLAPQVVLTEN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggtttatcaaccttaataaatctgccggattcacctcccatgactgtgtggcg
cgagttcgccgaatattacgattaaaacgggtcggacacgccggaaccctcgatcccgcc
gcaacgggagtattaccaatggcgctgggaaaagccactcgtttattgcaatttctccct
tctcataaagcttatcatgctagaattaaattcggtgtcaccaccaccaccgatgactta
gaaggagaaaccttaactgttcaatctgtaccgcatttacaacttgaacaaattcaagaa
attctccctcaatttatcggtaaaattgaacaagttcctcctatttatagtgcgattcat
gttcaaggaaaacgcttatatgatttagctagaaaaggagaaattattgaagttcctagt
cggatagtagaagtttttgagcttaaaattcttaactggtatccgggggaatttcccgaa
ttagaaattgcgatcgcctgtggttcaggaacctatattcgctctattgctagggattta
ggagctatacttaatactggagctactttagctaatttaatcagaaccgaaagcagtggt
tttggtttagaaaatagtctaaccttggaaaccttagaaacccaagttcaacagcaaata
tttttgcccctatctccaaatattgccttaaatcatttaacaaaaattatcctaaattat
gaatcaacaaaacgttggtttcaaggacaatctattattgtagaaaatcaaatcatagaa
gatcgtcccgtgagtgtctatgatcaaaatcaacaactattaggaataggaaaattaatc
gaaactcctgaacaaattctccttgctcctcaagttgttctcactgaaaattaa
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