Planktothrix rubescens: PCC7821_02236
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Entry
PCC7821_02236 CDS
T09709
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prun
Planktothrix rubescens
Pathway
prun03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PCC7821_02236 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prun03021
]
PCC7821_02236 (rpoA)
03400 DNA repair and recombination proteins [BR:
prun03400
]
PCC7821_02236 (rpoA)
Enzymes [BR:
prun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PCC7821_02236 (rpoA)
Transcription machinery [BR:
prun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PCC7821_02236 (rpoA)
DNA repair and recombination proteins [BR:
prun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PCC7821_02236 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
KH_PARP14_8
DUF6964
HHH_2
Motif
Other DBs
NCBI-ProteinID:
CAD5946281
LinkDB
All DBs
Position
I:2393321..2394298
Genome browser
AA seq
325 aa
AA seq
DB search
MEKGGPSVAQFKIECIESNTDTDRSQYGKFVLEPLERGQGTTVGNALRRVLLSNLEGTAI
TSARFANVNHEFATIQGVREDVLEILLNLKEVVLKSYTHQKQIGRLEVQGPATVTAGHFK
LPSEVEVVDKNQYIATLSPGSTLEMEIQVDKGTGYHAVERNRDEALAVDFLQIDAVFMPV
RKVNYTVEDARVGGTVEKDRLIMEIWTNGSLTPQEAISQSATKLVDLFTPLKDITLESIK
SDQNDDVDPTSQIPIEELQLSVRAYNCLKRAQINSVADLRDYTQEDLLEIKNFGQKSAEE
VIEALQKRLGITLPQERASKSVVSS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggagaagggaggtccatcggtggcgcagtttaagattgagtgtattgaatcgaacact
gatacagaccggagtcagtacggtaaatttgtcttagaaccgttagaacggggccaaggg
acaacggttggtaatgctctaagacgggttttactatcgaacttagaaggaacggcgatt
acatcggcacggtttgccaatgttaatcatgagtttgcaacaattcaaggggttcgggaa
gatgttttagagattttgctgaacctgaaagaagttgtactcaagagctatacccaccaa
aaacaaatcggtcgcttagaagttcaaggcccagcgacggtaacggcgggtcattttaag
ttgccttcagaagttgaggttgtagacaaaaaccaatatatcgctaccctatccccagga
tcaaccttggaaatggaaatccaagttgataagggtactgggtatcacgccgttgagcgt
aatcgggacgaggcactggctgtagattttctccaaattgatgctgtgttcatgcctgta
cggaaagtgaattacaccgtcgaggatgcacgggtgggtggaactgtagaaaaagaccgc
ctgatcatggagatttggacaaatgggagtttaaccccccaagaagccatcagccaatcc
gcgaccaaactggtggacttgttcactccgttgaaagacatcaccctggaatcaatcaaa
agtgaccagaatgatgatgttgatccgaccagtcaaatcccgattgaagaactacagtta
tcagttcgggcttataactgtctcaaacgcgctcaaatcaactcggtcgcagacttacgg
gattatactcaagaagacctattagaaattaaaaacttcggtcagaagtctgcggaggag
gtaatcgaggcgttacaaaaacgcttagggattacactgcctcaagaaagggcatctaaa
tcagtagttagtagttag
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