Planktothrix rubescens: PCC7821_02689
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Entry
PCC7821_02689 CDS
T09709
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prun
Planktothrix rubescens
Pathway
prun03420
Nucleotide excision repair
prun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PCC7821_02689
03430 Mismatch repair
PCC7821_02689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prun03400
]
PCC7821_02689
Enzymes [BR:
prun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCC7821_02689
DNA repair and recombination proteins [BR:
prun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCC7821_02689
MMR (mismatch excision repair)
Other MMR factors
PCC7821_02689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAD5953544
LinkDB
All DBs
Position
I:complement(2884342..2886753)
Genome browser
AA seq
803 aa
AA seq
DB search
MTDDLDLDSVSSVNPILTSEIVFSDLTINPLENIDQIRAFREQKIKEIYQSLRPGQQQMA
DWNGGPLAISAVPGAGKSTGMAFAAALASARHQLHSQHQLVIVTFTRSAAANIRAKVSQE
LKQMRLPLGGFFVYTLHGLALNIALKHPELSELNLENFTLILPTPSNRITRTCVEQWIAA
NPRHYQRLIEGVKFDGEETERLRRQSVLRTEVLPNLAWKVIQEAKSSGLQPQDLTNISEQ
IPDDYETLEIAAGLYENYQNILRSLNLIDYDEMILAALRVLDNPTVRQVWQNQVFAVFED
EAQDSTPLQSKLLRILASSSKSITDDLDTLNLVRVGDPNQAINSTFTTADPIYFRRFCND
CEQLKRLATMDQAGRSSCIIIDAANYMLSWVNRSKLAGNEQPFREQMIKLVGFSDHQSNA
NPPAYGRGLELWEMADIYQTVELIVQKIVTIIEDDPQGKFAILLRENKQGEFISNVFNHP
QLYNIKISEDFKSKIRVYDASQQARNSQIPAEILSLFQFLDRPHSPDYLKLALKVLGDRN
LIPNLDYNKIAIHPEEFLYPGPLDPPQSEEIRQCRYFCCQLLQARLELPPYQLISFLALS
LQYEKTELATADKLSERIGQKTFGNHSMGTILDVLNDIVSSEKFEPVDIDQESTSKDSPY
TREGQLTLITMHKAKGLDWDYVFIPFLQESTIPGSLRVLPQAKFLGEFTLSEVARAQIRA
AAHGEELIPDIATAWEQAKDLKTAEEYRLLYVAMTRAKRFLWMSVSRFSPYSWHKPENQQ
EQKACPVFIALKQQFPQHFFEKF
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgatcttgatctcgattcagtttcctccgttaatcctatcctaacttcggaa
atagtcttttctgatctgacaataaatccattagaaaatattgatcaaattcgtgcattc
cgagagcagaaaattaaagaaatttaccaaagtttacgtccgggtcaacaacaaatggcc
gattggaatggggggcccctagctatttctgcggttccaggggcgggaaaatcaacagga
atggcctttgctgcggcattggcgagcgcccgccatcaactccattcccagcatcaatta
gtgattgtcaccttcacccgttccgccgccgctaatattcgggcaaaagtcagtcaagaa
ctcaaacaaatgcgattacctttagggggattttttgtttatacattgcatggtttagcc
ctaaatattgccttaaaacatccagaattatcagaattaaatttagaaaattttacttta
attttacctactcctagtaatagaattacccgtacctgtgttgaacagtggattgctgct
aatcctcgccattatcaacgattaattgaaggagttaaatttgatggagaagaaacagaa
agattaagacgtcaatcggttttaagaacagaagttttaccgaacttagcttggaaagtg
attcaagaagctaaaagttcaggactacaaccgcaggatttaaccaatatttcggaacaa
attcctgatgattatgaaaccttagaaatagccgccggattatatgaaaattatcaaaat
atattgcgatcgctgaatttaattgactatgatgagatgattttagccgcattgcgagtt
ttagacaatccaacggttcgtcaagtttggcaaaatcaagtatttgctgtttttgaagat
gaagctcaagattccactcccctacaaagtaaactcttgagaattttagccagttcttct
aagtcaattactgatgatttagatactttaaatttagttagagtcggcgatccaaatcaa
gcgattaactccacatttactacggctgatcctatttattttcgtcgtttttgtaatgat
tgtgaacagttaaaacgattagctaccatggatcaagccggacgcagtagttgtattatt
attgacgcagctaactatatgttatcctgggttaatcgttcaaaattagctggaaatgaa
caaccttttcgagagcaaatgattaaattagtgggatttagtgatcatcaatctaatgct
aatcccccggcttatggtcgaggtttagaactctgggaaatggcggacatttatcagacc
gttgagttaattgtccaaaaaattgttactattattgaagacgatccccaaggaaaattt
gcgattttactaagagagaataaacagggagaatttatttctaatgtttttaatcatccc
caattatataatattaaaatttccgaagattttaaaagcaaaattcgggtttatgatgcc
tctcagcaggctagaaattctcaaattccagcagaaattttatctttatttcaatttttg
gatcgtccccattcaccagattatttaaaattagcattaaaagtattaggcgatcgcaat
ttaattccgaatttagattataataaaattgcaattcatcccgaagaatttctttatccc
ggcccccttgaccccccacaatcagaagaaattcgtcaatgtcgttatttttgttgtcaa
ttattgcaagcccgtttagaacttcctccctatcaattgatttcctttttagccctatcc
ttgcaatatgaaaaaacggaattagccacggcggataaattatcagaacgcatcggtcaa
aaaacctttggtaaccattccatgggaacaattttagatgttttaaatgatattgtcagt
tcagaaaagtttgaacccgtggatattgatcaggaatcaacctctaaagacagtccctat
acccgggaaggtcaattaacattaattaccatgcacaaagccaaaggattagattgggat
tatgtgtttattcccttcttacaagagtctacaattccggggagtttaagagttttaccc
caagccaaatttctaggagaatttaccctttcggaagtcgcccgtgcccaaattcgagcc
gctgctcacggagaagaattaattcctgatatcgccactgcttgggagcaagctaaggat
ttaaaaaccgcagaagaataccgattactctatgtcgccatgaccagagctaaacgtttt
ttatggatgtctgtgtctcgtttttctccctacagttggcataaacctgaaaatcagcaa
gaacaaaaagcctgtccggtttttattgcgttaaaacaacaatttcctcaacattttttc
gagaaattttag
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