Planktothrix rubescens: PCC7821_03060
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Entry
PCC7821_03060 CDS
T09709
Symbol
bphB
Name
(GenBank) Cyanobacterial phytochrome B
KO
K11354
two-component system, chemotaxis family, sensor kinase Cph1 [EC:
2.7.13.3
]
Organism
prun
Planktothrix rubescens
Pathway
prun02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PCC7821_03060 (bphB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
prun01001
]
PCC7821_03060 (bphB)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
prun02022
]
PCC7821_03060 (bphB)
Enzymes [BR:
prun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
PCC7821_03060 (bphB)
Protein kinases [BR:
prun01001
]
Histidine kinases
CheA family [OT]
PCC7821_03060 (bphB)
Two-component system [BR:
prun02022
]
CheA family
Cph1-Rcp1 (light response)
PCC7821_03060 (bphB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PHY
PAS_3
HisKA
PAS_9
PAS_2
PAS
PAS_4
PAS_8
GAF
HATPase_c_3
HATPase_c_5
PAS_7
RE_HaeII
DUF5765
Motif
Other DBs
NCBI-ProteinID:
CAD5959369
LinkDB
All DBs
Position
I:3290483..3294952
Genome browser
AA seq
1489 aa
AA seq
DB search
MEKTEKDYLALQESDEKFRLAFDKANIGMCLVDLQGNLFQVNEKISEIFGYSQDELKGLN
VSDLAIAEDKQISQKFIHGAVVAHDDSGRLEKRYRHRLGHIIYGEVSSSLVRDTEGNPLY
FISQVQDISERKRYEIDLEEARNALAKANAELEERVSVRTAELQKSETALRQSEMQFRRY
FEQNLIGMAMTSPSKAWINVNDKLCEILGYSFAELQELSWDKITHPEDLAIDLEKFNLVI
DGQIEGYEIDKRFIHKTGQIVYTSLAVQCHRKPNGKLDFFIALIQDISDRKKAEIALQES
QDFLQKVTDTSPNIIYIYDLQQQCNIYVNREIATILGYSPIEIQAMGANFFSTLMHPDDL
QNMPAEYARLARALDGEIYDCEYRMRNTQGEWRWLYSRHSVFSRDLKGQVKCTVGSAQDI
TERKLAETQLQQTYAELLQATRLKDEFLATMSHELRTPLNAILGMTELLQEEIYGSINEE
QMTALQTIENSGSHLLELINDVLDVAKIESGQVHLEISSISIAALCESSLLFIQQQARKK
NIQVHRVLPSNLPNIHVDERRIRQALINLLNNAVKFTLEGGTITLEVSEVRLESSTTNLT
PINYLKIAVIDTGIGISSENIPKLFQPFIQIDSALNRKYDGMGLGLALVKRLVELHGGTV
ELTSELGVGSCFAINLPINFGDPSIEDQTNSDLSEQDQIGQSQTEGLISPLILLAEDNEA
NIMNINTVNDLELVTLTNCDREPIHIPRSIQPHGLLMVLSETDLSIVQVSANSLDILGVE
PLDLLDRPLADFIGSDRITDIANCLERDFENINPLSISFVRAGSDTLDFKGIVHRAISGE
IVLELEPILDNSNKDFFHFYHQIKNTLSKIQATSDLSKLCNVIVQEISEITGFDRVMIYR
FNEGGDGNIIAEIKQPEQKAFLGLRYPDSDIPKQAKHLYTLNWLRLIPDMDYQPCQLVTS
PTANPEVEIQPLDMSYCGLRSISPLHIEYLKNMEVAASLTISLIQQQKLWGLIACHHNSP
KFIPYEVRTVCEFLGQLMSTELANKEANENLDYKLQLKNIQSQFVERLSKANDFVKELTA
DPEALLKLTGAAGAAICDNEEITLLGKTPQLDQLKLLLTWIPPQFDQDIFVTDALSHLYP
EAVAYKDVAGGLLAMAISKIQQRYVIWFRPEIAQTVTWAGNPEKPKRIEEDGSVTIFPRQ
SFEAWQEIVDGRSLTWLDCEVAGARELRQAIVDIVLRQAEDIALINVELERSNSELDAFA
YIASHDLKEPLRGIHNYATFLLEDYSELLQGDGADKLNTLVRLTKRMESLIESLLKFSRL
GRQELQMSPIALDHLLENVTELFGMNPQWENCQIRMPQSLPTVLGDRILLEEVFTNLISN
AFKYNDQSEKWAEIGWIETNAQNPDFVTISVHDNGIGIREKHLDSVFRIFKRLHSPNKYG
GGTGAGLTIVKKIIERHGGTIQVQSIYGQGTTFLFTLPIKVNISSLETV
NT seq
4470 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaacggaaaaagattatctagccctacaagaaagtgatgagaagtttcggctt
gcctttgataaggcaaatattggtatgtgtttagtcgatcttcaaggcaatctttttcag
gttaacgagaagataagtgaaatatttggttatagccaagacgaattgaaaggtttaaac
gttagcgatttggcaattgcagaggacaaacagattagtcaaaagtttatacatggggcg
gtagtagcgcatgacgatagcgggagattggaaaaacgctatcgtcatcgactggggcat
atcatttatggagaagtctcgtcatctttggtacgggataccgagggaaatcctttatat
tttatttcccaagtgcaggatatctctgaacgtaaacgatatgaaattgatctagaggaa
gctcgtaatgctcttgcaaaagccaatgcggaattagaagaaagggtgtctgtaagaaca
gcagagttgcaaaagagtgaaacggctctacgtcagagtgaaatgcaatttcgtcgttat
tttgaacagaatctcattgggatggcaatgacttctcctagtaaggcttggatcaatgtg
aacgacaaactctgtgagattttagggtattcttttgccgaattacaggaattatcttgg
gacaaaattacccatcccgaagatttagctatagatttagagaagtttaatctggtaatc
gatggtcaaattgaaggttatgaaattgataaacgctttattcataaaactggtcaaata
gtctataccagtctggctgtgcaatgtcatagaaaacctaatggtaagctggatttcttt
atagcgttgatccaagatattagcgatcgcaaaaaagctgaaatcgctttacaagaaagc
caagactttctgcaaaaagtgaccgatacttcaccaaatattatctacatttacgatctc
caacaacaatgtaatatctatgtgaaccgagagatagcaacaattctgggatatagtcct
atagagattcaggcaatgggggcaaattttttctcaacgctcatgcaccccgatgatctg
caaaatatgcctgctgaatatgcacgattagcaagagcattagatggcgaaatttatgat
tgtgaataccgcatgagaaatactcaaggagaatggcgttggctctacagtaggcattcc
gtatttagtcgagatctaaaaggtcaggtaaaatgtactgttggttctgcacaagacata
actgagcgcaaactagccgaaacccaacttcaacaaacctacgcagaactgctccaagca
actcgtcttaaggacgaatttttagctaccatgagtcatgaattgcgaactccacttaat
gccatcctcggaatgactgagcttcttcaggaagagatctatggttccatcaatgaagaa
cagatgacggcgctacaaactattgaaaatagtggttcccacttactagaattaattaat
gatgttctagatgtagccaaaattgaatcggggcaagtgcatttggagatatcgagtatt
tctatcgcggctctctgtgaatcaagtctcctttttatccaacaacaagctcgaaaaaag
aatattcaagtccacagggttctaccgtcaaacctaccgaatatccatgtggatgaacgc
cgcattcgtcaagccctaattaatcttctcaataatgctgttaaatttactctggaagga
gggacaatcactttagaagtatcagaagttcgccttgaaagcagtacaaccaatctaacg
cccataaattacttaaagatagccgtgattgatacggggataggcatctcatcggagaac
atcccgaaactgttccaaccctttatccaaatcgatagtgcgctgaaccgtaaatatgat
ggcatgggattgggtttggctttagtcaaaagacttgtagaacttcatggaggaaccgta
gaactgacaagtgagttgggagtcggtagttgctttgcgattaatcttcccattaatttc
ggcgacccatcaatcgaagatcaaactaactctgacttgtcagaacaagatcagattggt
caaagccaaactgaaggactaatttcacccttaattttgctggcagaagataacgaggct
aatataatgaatataaataccgttaatgatttagagctagttactctcacaaattgcgat
cgcgaaccgatacatataccgcgatcgatacagcctcacgggttactcatggtactcagt
gaaactgatctaagcatcgtgcaggttagtgccaatagccttgatattttgggggttgaa
cccttagatttgctcgatcgcccattagctgattttattggtagcgatcgcattaccgat
attgctaattgtttagagcgtgattttgagaatattaatcccttaagcattagctttgtt
cgcgcaggatctgacaccttagactttaaggggattgtccatcgcgctatcagtggcgaa
atagttttagagctagagccgatcttagataattctaataaggactttttccatttttat
catcaaatcaagaacactcttagcaaaattcaggcgacctcggatctgtccaaactgtgt
aatgtaatcgtgcaggaaatcagcgaaattacgggctttgatcgcgttatgatctatcgt
tttaacgaaggtggggatggcaatatcattgctgagataaaacagccagaacaaaaagca
tttctgggattacgctatcccgactctgatattcccaaacaagcaaaacatctctacacg
ctcaattggttgcgcctaattccagacatggattaccaaccttgtcaattagtaacaagc
cccacagcaaatccagaagtggagatccagccccttgacatgagctactgcggcttgcgc
tccatatcgccgctccatattgaatatctcaaaaatatggaagttgcagcatcgctaact
atttccctaattcagcagcaaaagctatggggtttgattgcctgtcatcacaatagcccc
aaatttatcccctacgaagtacggactgtttgcgagtttttgggacagcttatgtctacg
gaattagctaataaggaagcgaacgaaaatcttgattacaaattgcaacttaaaaatatt
caaagtcaatttgtcgaacgtctcagcaaagctaacgactttgtgaaagaacttacagcc
gatccagaagccttattaaaactgacgggcgctgcgggggcggcgatatgtgacaacgaa
gagattactttgctcggtaaaactccgcaactcgatcaattaaagctgctcttgacttgg
attccgccgcaatttgatcaggatatttttgtcaccgatgctctatctcatttgtatcct
gaagcagtagcatataaagatgtcgctggtgggctgctggcaatggcgatctccaagatt
caacagcgctatgtgatatggttccgtcctgagatcgcccaaactgtgacttgggcggga
aatccagagaagccgaaacgcatagaagaagatggctcggtgacaatatttccacgtcag
tcttttgaggcgtggcaagaaattgtggatggtcgctctctgacttggctggattgcgaa
gtggcgggggcacgtgaattacgacaggcgatcgtggatattgtgttacgccaagcggaa
gatattgccctaatcaatgtggaattagaacgcagcaatagcgagctagatgcctttgcc
tacattgcttcccatgatttaaaggaacctctacggggtattcataactatgcaactttc
ttgttagaagattacagtgagcttcttcagggtgatggtgctgacaaattaaatacgcta
gtacgattgactaaaagaatggagtcattaattgaatccttgctgaagttttcgcgtttg
ggcagacaggaattgcagatgtcgccgatcgctctcgatcacttgttagagaatgtaaca
gagttatttggcatgaatcctcaatgggaaaattgccagattcggatgccccaatcattg
ccgacagtgttgggcgatcgcattttgcttgaagaagtctttactaatctaatttctaat
gcctttaaatacaatgatcaatctgaaaaatgggcggaaattgggtggattgagactaat
gcacagaaccctgattttgtgacgatctctgtccacgacaatggcatcggtattcgtgag
aaacatttagactcggtgtttcggatctttaaacgtttacattctcctaacaaatacgga
ggcggaacgggtgcggggttaactattgtcaaaaaaattattgaacgtcatggcggcact
attcaagtacaatcaatttacgggcagggaactacatttttgtttactttaccaattaaa
gtaaatatctctagcctagaaactgtttaa
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integrated database retrieval system
