Planktothrix rubescens: PCC7821_03357
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Entry
PCC7821_03357 CDS
T09709
Symbol
sbcC
Name
(GenBank) Nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
prun
Planktothrix rubescens
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prun03400
]
PCC7821_03357 (sbcC)
DNA repair and recombination proteins [BR:
prun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PCC7821_03357 (sbcC)
Archaeal homologous recombinant proteins
PCC7821_03357 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
Rad50_zn_hook
AAA_21
AAA_15
ABC_tran
RNA_helicase
DUF5955
Motif
Other DBs
NCBI-ProteinID:
CAD5964188
LinkDB
All DBs
Position
I:3591916..3595026
Genome browser
AA seq
1036 aa
AA seq
DB search
MIPQKLTLKNFLSYREATLDFSGLHTACICGSNGSGKSSLLEAMAWAIWGESRAESKDDI
IYMGELETQVDFIFISQGNLYRVIRNRRRGQSGTLEFQVATTVLQEIEDLDQIKFRTLTE
KGIAPTQQKIIDYLKLDYDTFTNSAYLRQGKADEFMIKRPAERKEILANLLKLDQYDGLS
DKAKDLAKSYKSQAEILEQTLTSNQVQIDQKGQLEQDIIQLQNTIDQLQEKQAQDRDQYQ
QLQAQQHHRQSWEKLLTGQQQQHQTFAQDYRRLQQELVTTQQQSQELEAVLKQETEIQTG
YTHFQTLQTTEETLSAQFKIYQDSQQQRQQLQEQQRQHLNTLQQQIQGLQARLEALTQQE
QDYSQILSQKTDIEAGLEQLKTARNRLTHFDQLQLEVTPILQQRQRLQTELDRAQSRQQA
RLEELKTSVGKLQRTLNQHRPQLEQQSQSIASQIIELDKKKVYQLRVREKGQERHGFIDR
LNTVKRDYEEKLGELDQKIQLLSKSESEAPETEELPLLQSQFPPCPLCDRPLDEHHWNLV
ISKQQNQQQEFRNEIWVIHEQLVVADRELKILQEEYRQIQEDLLPYEELREQRGKIQAQL
ESLDQDEQQLQQLILEEKAVQTILETGDYATDLYAELRDLEQKLSQLNYNEQSHALARNE
EKRYRWAEIKYSQIRDAQDKLTKINTQKPELETKIQSLTQSLTEEKNNSEIQQKIIILEQ
KINQMGYNVEEHNRIRTELRQAQIWLTRTEQLNQAKQQYPILQKRLQELETITQERVKNL
QAIQGQIELLQEQLKETPDPTESLKQLEQLIQQQRLKLDHYLGQFGSLQQQQTQLDNLNA
QQIEIKTQLDTTRRQYRVYDELAKAFGKNGIQALMIENVLPQLEAETNQILSRLSSNQLH
VQFVTQRTSGRGSKSSKNAPKMIETLEILIADARGTRSYETYSGGEAFRINFAIRLALAK
LLAQRAGTSLQMLIIDEGFGTQDAEGCDRLIAAINAIASDFACILTVTHIPSLKEAFQAR
IEVHKTSQGSQIYLSI
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgattccccaaaaactgaccctaaaaaatttcctgagttatcgagaagcgaccctagat
tttagtggattacataccgcttgtatttgcggttccaacgggtcaggaaagtcatcttta
ttagaagcaatggcttgggcaatttggggggaaagtcgggcagaatcgaaggatgatatt
atctatatgggagaattagaaacccaggtcgattttatatttattagtcagggaaactta
tatcgggtgattcgtaaccgccgccgtggtcaatcgggaaccttagaatttcaagtagca
accaccgttttacaagaaattgaagatttagatcaaattaagtttcgcacccttacagaa
aagggaatagcccccactcaacagaaaattatagactacttaaaactagattatgatacc
tttactaattccgcctatttgcgtcagggaaaagccgatgaatttatgatcaaacgtccc
gccgaacgtaaagaaattctggctaatttattaaaattagatcaatatgatggcttatca
gataaagccaaagacttagccaaaagttataaatcccaagcggaaattttagaacaaacc
ttaaccagtaatcaagtccaaatcgaccaaaaaggtcaactggaacaggatattattcaa
ctacaaaataccattgatcagcttcaggaaaaacaagcccaagatcgagatcaatatcaa
caactacaagcccaacaacatcatcgtcaatcttgggaaaagttattaacaggacaacaa
caacagcatcaaacctttgctcaagattatcgcagattacaacaggaattagttactact
caacagcaaagtcaagaattagaagcagtattaaaacaagaaacggaaattcaaaccgga
tatacccattttcaaaccctacaaaccacagaagaaaccctatcggctcaattcaaaata
tatcaagattcccaacaacaacgccaacaattacaggaacaacaacgccaacatctaaac
accttacaacagcaaattcagggactacaagcccgtttggaagccctaacccaacaggaa
caagattactcacaaattttaagccaaaaaactgatattgaagcgggattagaacagtta
aaaaccgctcgcaatcgtttaactcactttgatcaattgcaattagaagttaccccaatt
ttacaacagcgtcaacgcttacaaacggaattagatcgggctcaatctcgtcaacaagcc
cgcttagaagaattaaaaacctccgtcggaaaattgcaacgaactctcaaccagcatcgc
ccccaattagaacaacaatcccaaagcattgcgagtcaaattattgaactggataagaaa
aaagtttatcaattaagggtgagggaaaaaggacaagaacgtcatggttttattgaccgc
ttgaatacggtaaaacgggattatgaggaaaaattaggggaactggatcagaaaattcaa
ctgttatcaaaatcggaatctgaagcacctgaaaccgaagaattaccgttattgcaatcg
cagtttcccccctgtccattatgcgatcgccccctagacgaacatcactggaatttagtt
atttctaaacagcaaaaccaacaacaggaattcagaaatgaaatttgggtgatccatgaa
cagttagtagttgcggatcgagaacttaaaatattacaggaagaatatcgacaaatccaa
gaggatttattaccctatgaagaattgcgagaacaacggggaaaaattcaagctcagtta
gaatccttagatcaagatgaacaacaattacaacaattaattttagaagaaaaagccgtt
caaactattttagagacgggtgactatgcaacggatttatatgcagaattacgagattta
gagcagaaattaagccaactaaattataatgaacaaagccatgcgttagctaggaatgag
gaaaaacggtatcgttgggcggaaattaaatatagtcaaattcgagatgctcaagacaaa
ttaaccaaaattaatactcaaaaaccagaattagaaaccaaaattcaatccttaacccaa
agtttaactgaagaaaaaaacaactctgaaattcaacaaaaaattataattttagagcaa
aaaatcaaccaaatgggttataatgttgaggagcataatcgcatccgtacagaattgcgt
caagctcaaatttggttaactcgaaccgaacaattaaaccaagccaaacaacaatatcct
attctgcaaaaacgccttcaagagttagaaaccattacccaagaacgggtaaaaaaccta
caagcaatccaaggacaaattgaactattacaagaacaattaaaagaaactcccgacccg
acagaatcattaaaacaattagagcaattaattcaacaacaacgactaaaattagatcat
tatttaggacaatttggcagtttacaacaacaacaaactcaattagataatttaaacgct
caacaaatcgaaattaaaacccaattagataccacccgccgtcaatatcgagtttacgat
gaattagcaaaagcctttggtaaaaatggaattcaagccctaatgattgagaatgtttta
ccccaattagaagcagaaaccaatcaaattttatctcgattatcctcaaatcaactccat
gttcaatttgttacccaacgtactagcggacggggtagtaaatcctcaaaaaatgctcct
aaaatgattgaaaccttagaaattctaatcgcagatgcgcggggaactcgttcctatgaa
acctattccgggggggaagcctttagaattaattttgctatccggttagccctagctaaa
ctattagcacaacgggcgggaacttctctacaaatgttaattattgatgagggatttgga
acccaagacgctgaaggttgcgatcggttaattgcggctattaatgcgatcgcttctgat
tttgcttgtattttgactgtcacccatattcctagtttaaaagaagcttttcaagctaga
attgaagttcataaaactagccaaggttctcaaatttatctctcaatttaa
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