Planktothrix rubescens: PCC7821_03940
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Entry
PCC7821_03940 CDS
T09709
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prun
Planktothrix rubescens
Pathway
prun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCC7821_03940 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prun03019
]
PCC7821_03940 (pnp)
03016 Transfer RNA biogenesis [BR:
prun03016
]
PCC7821_03940 (pnp)
Enzymes [BR:
prun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PCC7821_03940 (pnp)
Messenger RNA biogenesis [BR:
prun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PCC7821_03940 (pnp)
Transfer RNA biogenesis [BR:
prun03016
]
Prokaryotic type
tRNA degradation factors
PCC7821_03940 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
POU2AF2
aRib
Motif
Other DBs
NCBI-ProteinID:
CAD5973382
LinkDB
All DBs
Position
I:4318469..4320823
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AA seq
784 aa
AA seq
DB search
MRSDEIEDQKPQSNFKIPSVASEIATRKLLTVHDQGLIARVYYSLPVLITVLRWRQRENS
GRRRKIKYMEEIIKSISFDGRDIRLKIGLLAPQAGGAVLIESGDTSVLVTATRAEGRPGL
DFLPLLVDYEERLYAGGRIPGGFLRREGRPPDRVTLTSRLIDRPLRPLIPHWLRDDIQVV
ATTLSMDEQVPPDVLAVTGASVAVILARIPFFGPMAAVRVGLVGDDFIINPTYREVKNGD
LDLVVAGSPDGVVMVEAGANQLPEQDIIEAIDFGYEAVCDLIKAQEELMRDLGIEIKPQE
PPEGNLGLIQFVRDRVTLPVKQVLKQHDLDKTARDANLDKIKASEVIAPIEALATDDPLR
VAVAEDSKLVSQIFKDITKTLMRQQIVEDSVRVDGRSLDQVRPVSCKVSCLPKRVHGSGL
FNRGLTQVLSIATLGTPGDAQDLDDLHPQEEKRYMHHYNFPPYSVGETKPMRSPGRREIG
HGALAERALVPVLPSKDQFPYVIRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPISKPVS
GAAMGLIKEGEEVRILTDIQGIEDFLGDMDFKVAGTDTGVTALQMDMKITGLPMKTVADA
IHQAKPARLHILEKMLEVIGKPRSDLSPYAPRLLTLKIDPDLIGLVIGPGGKTIKGITEE
TGVKIDIDDDGTVTIASTDSENAARAYQIIQGMTRKLNTGDVYVGRITRIIPIGAFVELL
PGKEGMIHISQLADYRVPRVEDEVSVGDEVIVKVREIDSKGRINLTRLNIHPDEAAAARA
AGAK
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtcggatgagattgaagatcagaaacctcagtccaactttaaaattccctctgtt
gctagtgaaatcgcgactagaaaactgttaactgttcatgaccaagggttgattgcgagg
gtttactactccctacccgtgctcatcaccgtgttacgatggcgacagagagagaatagt
ggaagaagaaggaagataaaatacatggaagagatcattaagtcgatatcctttgatgga
agggatattcgactcaaaataggtttacttgcgccacaggcaggtggagccgtattaatc
gagtctggagatacatcagttctagtgactgcgactcgcgccgaaggtagacccggattg
gactttctgcccttgttggtggactatgaggagcgactgtacgcggggggaagaattcca
gggggattcttacgccgggaaggtcgtccacccgatcgcgttaccttaaccagtcgtttg
attgaccgtcccttacgtcctctgattccccattggttgcgggatgatattcaggttgtg
gccacaaccctgtcgatggatgaacaagtacccccggatgttttagcggtgacgggtgct
tctgtagcggtgatcttggcaagaattcccttttttggcccgatggctgcggtacgagtt
gggttagtcggagatgactttattatcaatccgacttaccgggaagtcaaaaatggggat
ttggatttagtcgtggcgggttcccctgatggcgtggtgatggtggaagcgggtgcgaac
caactaccggaacaggatattatcgaagcgatcgactttggttatgaagcggtttgtgat
ttaatcaaggcccaagaggaattaatgcgggacttgggaattgaaattaaaccacaggag
ccaccagagggaaatctagggttaatccagtttgtccgcgatcgcgtcactctcccggtt
aaacaggttctcaaacaacatgatctggataaaaccgcccgggatgccaacctagataaa
atcaaggcaagtgaggtgattgctccgattgaagctctagccacagatgatccactccgg
gtggcggtggctgaggattctaagttggtgagtcagattttcaaggacatcaccaaaacc
ttgatgcgtcagcaaattgttgaagatagcgtgcgggtggatggtcgtagcttggatcag
gtgcgtccggtatcttgtaaggtcagttgtttaccaaaacgggtacatggtagcggtttg
tttaatcgcggtttaactcaagtgttgtcaattgccactttagggacgcccggagatgct
caggatttggatgacttgcatccccaggaagaaaaacgctatatgcaccactacaatttt
cccccttattcggttggggaaactaaacccatgcgatcgcctggacgtcgggaaattggt
catggagctttagcggaacgggccttagttccggtattaccttctaaggatcagttcccc
tatgtgattcgggtggtttcagaggtcttatcttctaacggttcaacttctatgggttcg
gtctgtggatcgactctggcgttgatggatgccggggtgccgatttctaaacccgtgagt
ggggcggcgatgggattaattaaagaaggggaagaagttcggattctcactgatatccaa
ggaatcgaggactttttaggagatatggatttcaaggtggcggggacagataccggagtc
actgccctacaaatggatatgaaaatcaccgggttgccgatgaagacggtggcggatgcc
attcatcaagctaaaccagcccgactgcatatcctagaaaaaatgttggaggtaattggc
aaacctcgttcggatttgtctccctacgctcctcggttattaaccttaaaaatcgatccc
gatttgattggtttggtgattgggcctggagggaaaaccattaaggggattaccgaagaa
accggagtcaaaattgatattgatgatgatggtacggtgacaattgcttccaccgatagc
gaaaatgcggctcgcgcctatcaaatcattcaaggcatgactcgcaaactgaataccggg
gatgtgtatgtgggccgaattactcggattatcccgattggggcatttgtggaattactt
cctggtaaggaagggatgattcatatttcccagttagcagattatcgggttcctcgggtt
gaggatgaagtctccgtcggggatgaagtgattgtcaaagttcgggaaattgacagcaaa
ggtcggattaatcttacccgtctgaatattcaccccgatgaagctgcggctgcacgggcg
gcaggggcgaaatag
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