Planktothrix rubescens: PCC7821_04044
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Entry
PCC7821_04044 CDS
T09709
Symbol
cmpR
Name
(GenBank) HTH-type transcriptional activator CmpR
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
prun
Planktothrix rubescens
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prun03000
]
PCC7821_04044 (cmpR)
Transcription factors [BR:
prun03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PCC7821_04044 (cmpR)
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_28
PBP_like
Motif
Other DBs
NCBI-ProteinID:
CAD5974821
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Position
I:complement(4413613..4414662)
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AA seq
349 aa
AA seq
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MIKIPKIIKYWVKGGYRILMQATLHQLKVFEAVARHRSFTKAAEEMMITQPTVSTQVKQL
TQTVGLPLFEQIGKQLYLTEAGESLLSTCQNIFEQLDNLEMQIAALKGTKQGRLRLGVVS
TAKYFVPRLLGYFCQQYPGIDIALQVTNHATLIQRMQDNEDDLYILSQPPEDIALSSQPF
LDNPLVVVARQDHPLVGEKNIPIKSLMGEPFIMREQGSGTRQAIQNLFDRYKIDVKVRLE
LGSNEAIKQGIAGGLGISVLSKHTLIAEQLMGELAILDVQHFPIHLRWYVTHLEGKQISI
IAETFLKFLLENSNHVPTLETITLNQQRSANNGHENLVKMGAGINNLRI
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatcccgaaaattatcaaatattgggtaaaaggaggatatagaattttgatg
caggcaacattacaccaattaaaggtatttgaggcggtggcccgtcatcgtagctttact
aaagccgccgaagaaatgatgattacccagccaacggtctccacccaagttaaacaactg
actcagaccgtgggtttaccgttatttgaacaaattggcaaacaactctatcttaccgaa
gccggggaatctttattatctacctgtcagaatatttttgaacagttggataatttagaa
atgcagatagcagcattaaaaggaacaaaacaaggacggttacggttaggagtagtttca
acagctaaatattttgtccctcgattattaggttatttttgtcaacaatatccggggatt
gatattgccttgcaagtcaccaatcatgccactttaattcaacgaatgcaagataatgag
gatgatttgtatattctgagtcaacctcctgaagatattgctttatccagtcaacctttt
ttagataatcctttagtagtggtggctagacaggatcatcctttggtgggagaaaaaaat
attccaattaaatctttaatgggagaaccttttattatgcgagaacaaggttcaggaacc
cgacaggcgattcaaaatctttttgatcgttataaaattgatgtaaaagttcggttggaa
ttaggcagtaatgaggcaattaaacaaggaattgctggtggattaggaatttcagtttta
tctaaacatactttaattgcagaacaactcatgggagaacttgctattttagatgtgcag
catttcccgattcatttgcgttggtatgtcacccatttagaaggaaagcaaatatctatt
attgcagaaacatttttaaaatttttattagaaaatagtaatcatgttcctaccttagaa
acaatcaccttaaatcagcaacgctctgcaaacaatggtcatgaaaatttagtgaaaatg
ggagcggggattaataatttaagaatatag
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