Planktothrix rubescens: PCC7821_04071
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Entry
PCC7821_04071 CDS
T09709
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prun
Planktothrix rubescens
Pathway
prun03420
Nucleotide excision repair
prun03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PCC7821_04071 (uvrD)
03430 Mismatch repair
PCC7821_04071 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prun03400
]
PCC7821_04071 (uvrD)
Enzymes [BR:
prun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCC7821_04071 (uvrD)
DNA repair and recombination proteins [BR:
prun03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PCC7821_04071 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
PCC7821_04071 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
ResIII
CarD_TRCF_RID
AAA_16
GA
Laminin_I
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAD5975164
LinkDB
All DBs
Position
I:4443236..4445680
Genome browser
AA seq
814 aa
AA seq
DB search
MCPRPPATDKIEVDSIPVFSVAMTQTIDFLSHLNTCQRQAVEHFCGPMLVVAGAGSGKTR
ALTYRIANLIRSHRVHPENILAVTFTNKAAKEIKERVELIFAQQQAELEFGKPLSALAAD
EQTRLKSKVYRSISKHLWMGTFHSLCARILRYDINKYQDESGRKWDKNFSIFDEDDAQKL
VKHIVLKDMNLDDKKFEPKKIRYSISNAKNLGFSPQQYARENPDYYGRVVSEVYSSYQSQ
LASNNALDFDDLIRVTVDLLSQNEQILAYWHQKFCHILVDEYQDTNRTQYNLIRLLVTNG
ENPRTIKNWQNRSIFVVGDVDQSIYSFRMADYKILLEFQQDFGDRLPDDDTRTMIKLEEN
YRSRENILQVANHLIQQNTERIDKILRPTRGEGLPIYCYRADDEVDEAKFILSQIQEISQ
QNPELDYGAFAILYRTNAQSRALEDVLLRNNIPYTVVGGLRFYDRKEIKDSISYLRVIAN
PADSISLLRIINVPRRGIGKTTIDGLFNASKQLGIPLWEVLSDEDSVNTIAGRSAKSVNQ
FAQTIKTWQERLEDHSAMQILEGILQDAGYIQDLKNEGTDEAENRLENIKELTNAVSQFQ
EEYEDNTLGGFLASASLASDLDNLKEGQQAVSLLTLHAAKGLEFPIVFLVGLEQGLFPNY
RSLNDPLSIEEERRLCYVGITRAQEQLFLTHACQRRLWGTLESCIPSMFLQELPEGLIHS
YTPPIQPKTTKNKNKGIKQESKSPTEIKQPAKSDKLESNVKDWKVGDKVFHRTFGIGEVT
HIFSNKDKMSLAIKFGSLSPKILDPNTVPLQRFK
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
gtgtgtccgcgacccccggctacggataaaatagaagttgattcaattcccgtgttttct
gtagccatgactcaaacaattgatttccttagccatctaaatacctgccaacgtcaggcg
gtggaacatttttgtggcccgatgctggtggtggcgggggcaggttcgggtaaaacacgg
gctttaacctatcgcatcgctaatttaattcgcagtcatcgggttcatcctgagaacatt
ttggcggtgacttttactaataaagctgccaaggaaattaaagaacgggttgagttaatt
tttgctcaacaacaggcagaactcgaatttggaaaacccttatcagctttagctgccgat
gaacaaactcgcttgaaatcaaaggtttatcgcagtattagcaaacatctttggatggga
accttccatagtttatgcgctcggattctaagatatgatattaataaatatcaagacgaa
agtggcagaaagtgggataagaatttctccatctttgatgaagatgatgcccaaaagtta
gttaagcatattgttctcaaagatatgaatttagatgataagaaatttgaacctaaaaaa
attagatattctattagtaatgctaaaaacctagggttttcgcctcaacaatatgccagg
gaaaatcctgattattatggtagagtcgtatcggaagtttatagttcctatcaatctcaa
ttagcttcaaataatgccttagattttgatgatttaattagagtcaccgttgatttactc
agtcaaaatgagcaaatattagcctattggcatcaaaaattctgccatattttagtagac
gaatatcaagatactaaccgcactcaatataatttaattcggttattagttacgaatggg
gaaaaccccagaaccattaaaaattggcaaaatcgttctatttttgtggtgggagatgtg
gatcaatctatttattcatttcggatggcagactataaaatattgttagaatttcaacag
gattttggcgatcgcctccccgatgatgatactcgtactatgattaaactggaggaaaat
tatcgctcccgggaaaatattttacaagtagcaaatcatctgattcaacaaaataccgaa
cgcattgataaaatcctccgtcccacccgaggagaagggctaccaatttattgttatcga
gcagatgatgaagtagatgaagccaaatttattctatcacaaattcaagaaattagtcaa
caaaatcccgaattagattatggtgcgtttgccattttatatcgaaccaacgcccaatct
cgcgccctagaagatgtgttattaagaaataatattccctataccgttgtcgggggatta
aggttctatgaccgcaaagaaatcaaggattctatctcttatttacgagtaattgctaac
ccggccgatagtattagtttacttagaattattaatgttccccgtcgaggtattggtaaa
accactattgatgggttattcaatgcgtctaaacagttaggaatacccctttgggaagtg
cttagtgatgaagattctgttaataccatagccggacgttcagcaaaatccgtaaatcaa
tttgcccaaactattaaaacttggcaagaacgcctagaagaccattccgccatgcaaatt
ttagaaggaattttacaggatgcgggttatattcaagacttgaaaaatgaaggaacagat
gaagccgaaaaccgcttagaaaatattaaagaattgacgaatgccgtctcccaatttcaa
gaggaatatgaggataataccctgggtggatttttagccagtgcctccttagcttccgat
ttagataacttaaaagaaggacaacaagcggtttccttattaaccctccatgcagcgaaa
ggattagaatttcccatcgtctttttagtcggtttagaacagggacttttccccaattat
cgcagtttaaatgatcccttatctattgaagaagaacgacgtttatgttatgttgggatt
actcgcgcccaggaacaattatttttaacccatgcttgtcaacggcggttatgggggact
ttagaatcctgtatcccctcaatgtttttacaggaattacccgaaggattaattcatagt
tatactcctcccattcaacccaaaacaactaaaaataaaaataagggaattaaacaagag
tcaaaatcaccaactgagattaaacaacctgccaaaagtgacaaattagaatcgaatgtt
aaggactggaaagttggggataaagtctttcatcgtacctttgggattggagaagtaacc
cacattttctcaaataaagataaaatgtctttagcgattaaatttggcagtctcagtcct
aaaattcttgacccaaatactgttcccttacaacgtttcaaataa
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