Planktothrix rubescens: PCC7821_04631
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Entry
PCC7821_04631 CDS
T09709
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
prun
Planktothrix rubescens
Pathway
prun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PCC7821_04631 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prun03019
]
PCC7821_04631 (recQ)
03400 DNA repair and recombination proteins [BR:
prun03400
]
PCC7821_04631 (recQ)
Enzymes [BR:
prun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PCC7821_04631 (recQ)
Messenger RNA biogenesis [BR:
prun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PCC7821_04631 (recQ)
DNA repair and recombination proteins [BR:
prun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PCC7821_04631 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_38
RE_AccI
Helicase_Sgs1
HHH
Motif
Other DBs
NCBI-ProteinID:
CAD5980566
LinkDB
All DBs
Position
I:5135079..5137265
Genome browser
AA seq
728 aa
AA seq
DB search
MSGLISTPFAQPQSLEQSLKHFFGYDSFRPGQREIIDQALQKRDLLIIMPTGGGKSLCFQ
LPALLKPGLMIVVSPLIALMQDQVEALQDNGVGATFLNSTLTAAEAKSRETAILKGDIKL
LYVAPERLLSDRFLFFLDTLEEQLGISAFAIDEAHCVSEWGHDFRPEYRKLKQLRIRYPK
IPVLALTATATNRVRQDIIQQLELKNPYIHVASFNRPNLYYEVIPKKKQTFTQLLKIIQD
VGGSGIIYCLSRKNVEDLAFRLQNHGISALPYHAGLEDQIRSENQTRFIRDDVQIMVATV
AFGMGINKPDVRFVIHYSLPRTLESYYQESGRAGRDGESARCTLFFSYGDIKTIEYLIEQ
KPDPDEQRIARQQLRQMLDYAEASECRRTVQLSYFGEFFSENCAKCDNCQTQNPVEDWTI
EAMKFLSCIARCHERFGMNYIIDVLRGSKSQKILDRRHDQLSTYGIGKDKTAEEWKNLGR
SLLRQGLLDQTTDGYAILKLNSRSWEVMKRERTVEITVIKEQNVEKSTRSLAIEAEMLFE
QLRQLRKKLADEQSIPPYMVFSDSTLKLMAQQRPQNLEELSQISGVGSYKLERYGKEFTE
AIFTYCHGQKLSNSSSKKSESKRLTLEDLSDSLIMTLSLYQDGLSLNAIANERGLKTSTI
ADHLAQLIAANQNINIDQFVEPERQKNIIQAIEKVGDISLKTIYECLGENYNYEEIKMVR
EYWRQHPN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggctaatttctactcccttcgcccaaccccaatccctagaacagtctcttaaa
catttttttggttatgattcctttcgacccggacagcgcgaaataattgaccaagcgcta
caaaagcgagatttattaattattatgcccaccggaggcggaaagtctctgtgttttcaa
cttccagctttattaaaacctggattaatgattgttgtgtctcctttaattgccttaatg
caagatcaagtggaggcattacaagataatggagttggtgctacctttctcaatagtacc
ctaacggctgcggaagcaaaatcgcgggaaacggcaattttaaaaggagatattaaactg
ctttatgttgccccagaacgattattatccgaccgatttttattttttttagacacccta
gaagaacagttgggaatctctgctttcgccattgatgaagcccattgtgtttctgaatgg
ggacatgattttcgcccagaatatcgaaaattaaaacaactgcgaattcgttatcctaaa
attccagttttagccttaacagcaacagcaaccaacagggtgagacaggatattattcaa
cagttagagttaaaaaatccctatattcatgttgccagttttaatcgccctaatttatat
tatgaagtgattcccaagaaaaaacaaaccttcacccagctattaaaaattattcaggat
gtgggaggttcgggaattatctattgtttaagtcgaaaaaacgtagaagacttggcattc
cgattacaaaatcatgggatttcagccctaccctatcacgccggacttgaagatcaaatc
cggtcagaaaatcagactcggtttattcgagatgatgttcaaattatggtggcgacggtt
gcctttggcatgggaattaataagcccgatgtacgctttgtaattcattatagtttaccc
cgaaccttagaaagttattatcaagaatccggtcgggcgggacgggatggagaatcggct
agatgtacattattttttagttatggtgatattaaaaccattgaatatttaattgaacaa
aaacccgatcccgatgaacaacgcatcgcccgtcaacagttaagacaaatgttagattat
gccgaagcatcggaatgtcggcgcaccgttcaattgagttattttggtgaatttttctcg
gaaaattgtgcaaaatgtgataattgtcagacacaaaatccggtggaagattggacaatt
gaagcgatgaaatttttatcttgtattgcccgatgtcatgaaagatttggcatgaattat
attattgatgtattaagaggatcgaaaagtcaaaaaattctggatcgacgtcatgatcaa
ctttctacttatggtattggtaaggacaaaacggcggaagaatggaagaatttaggccga
tctcttttacgtcaaggactcttggatcaaaccactgatggttatgctattttaaagtta
aattcccgcagttgggaagtgatgaaacgggaaagaaccgttgaaattactgttattaaa
gaacaaaatgtcgaaaaatcgactcgttctttagcaatagaagcggaaatgttatttgaa
cagttgcgccaactacggaaaaaattagccgatgaacaatctattcctccctatatggtt
ttttccgattctacgttaaaattaatggcacaacaacgaccccaaaatttagaagaatta
agtcaaatttctggagtcgggagttataaattagaacgttatggtaaagaatttactgaa
gctatttttacctattgtcatggacaaaaattgtccaattcttcctctaaaaaatcagaa
tctaaacgtctaaccctagaagatttatccgatagtttaatcatgactttatctttatat
caagacggtttaagtttgaatgcgatcgccaatgaacgaggattaaaaaccagtaccatt
gccgatcatttagcccaattaattgccgccaatcaaaatataaatattgatcaatttgtt
gaacctgaacggcaaaaaaatattattcaagccatcgaaaaagttggagatatcagctta
aaaacaatttatgaatgtttgggagaaaactataattatgaagaaataaaaatggttaga
gaatactggcgacagcatcctaattaa
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