Propioniciclava coleopterorum: G7070_01035
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Entry
G7070_01035 CDS
T06483
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
prv
Propioniciclava coleopterorum
Pathway
prv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G7070_01035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prv03019
]
G7070_01035
03009 Ribosome biogenesis [BR:
prv03009
]
G7070_01035
Enzymes [BR:
prv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
G7070_01035
Messenger RNA biogenesis [BR:
prv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G7070_01035
Ribosome biogenesis [BR:
prv03009
]
Prokaryotic type
rRNA processing factors
G7070_01035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
QIK73743
UniProt:
A0A6G7YAB9
LinkDB
All DBs
Position
complement(222108..224180)
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AA seq
690 aa
AA seq
DB search
MAELTASREKGEQEDAARDDADVTAALDSLAAAIGGDQPAASDEDTDDDNDGDSDDSEDA
DGENDDATPRRRRRRRGGRRRRRSTDEHDGDSDDSDSDEDSSDGGDAEGEDASEAGASDE
GDDGDGDDHSESSSGSSRRRRRRRRRGEDTGAADEDGVDVVIKVREPRRTKSPNDEITGI
EGSTRMEAKRQRRREGRAAGRRRAPILSEAEFLARRESLDRQMLIRQAEDYTQIAVLEDG
ILVEHYVDRDSSASLIGNVYLGRVQNVLPSMEAAFIDIGRGRNAVIYAGEVDWDAYGVTG
EDRRIEKVLKSGQTILVQVTKDPIGAKGARLTGHISVPGRYVVYCPGGQLSGISRKLPDG
ERARLKGILDAAVGDNASVIVRTAAEGASQDELERDVHRLQAQWEVIEKKVKAGSAPQQL
YAEPDLTVRIVRDLFTEDFTALVVEGNGQGEDAWDTVEGYVTHVAPHLSERLRRWDRETE
GDLFDKFRVNEQVSKALERKVHLPSGGSLIIDRTEAMTVIDVNTGKFTGTSGNLEATVTS
NNLEAAEEVVRQLRLRDIGGIIVIDFIDMVLPANRELLLRRLVECLGRDRTRHQVAEVTS
LGLVQMTRKRIGTGLAEAFTVSCETCNGRGYHVHDAPVATQSPADGGDRDHGRRPSRSRS
GRSRGRSDNGKGSESNGGDHAAAGSAAADS
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
ctggccgagctgaccgcctcgcgcgagaagggcgagcaggaggacgccgcgcgcgacgac
gccgacgtcaccgccgcgctcgacagcctcgcggccgccatcgggggcgaccagcccgcg
gcgtccgacgaggacaccgacgacgacaacgacggcgattccgacgactccgaggacgcc
gacggcgagaacgacgacgcgacgccgcgccgccgccgtcgccgccgcggcggccgtcgc
cggcgccgcagcaccgacgagcacgacggcgattccgacgattcggactccgacgaggac
tcctccgacggcggcgacgccgagggcgaggacgcctcggaggccggcgcgtccgacgag
ggcgacgatggcgacggtgacgaccactccgagtcgtcctccggctcgtcgcgccgccgc
cgccggcgccgccgccgcggtgaggacaccggcgcggccgacgaggacggcgtcgacgtc
gtcatcaaggtccgcgagccccgtcgcaccaagtcgcccaacgacgagatcaccggcatc
gagggctccacgcgcatggaggccaagcgtcagcgccgccgcgagggccgcgccgccggc
cgccgccgcgccccgatcctgtccgaggccgagttcctggcccggcgcgagtcgctcgac
cggcagatgctgatccgccaggccgaggactacacccagatcgcggtgctggaggacggc
atcctggtcgagcactacgtggaccgcgacagctcggcgtccctgatcggcaacgtctac
ctggggcgcgtccagaacgtgctgcccagcatggaggccgccttcatcgacatcggccgc
ggccgcaacgccgtgatctacgccggcgaggtcgactgggacgcctacggcgtgaccggc
gaggaccgccgcatcgagaaggtgctcaagtccggccagacgatcctggtgcaggtcacc
aaggatccgatcggtgcgaagggcgcccgcctgaccggccacatctcggtcccgggccgc
tacgtcgtgtactgcccgggcggacagctctcgggcatctcccgcaagctccccgacggg
gaacgggcccgcctcaagggcatcctggacgccgccgtcggcgacaacgcctcggtcatc
gtgcgcaccgccgccgagggggcgagccaggacgagctggagcgcgacgtccaccgcctg
caggcgcagtgggaggtcatcgagaagaaggtgaaggccggctcggccccgcagcagctc
tacgcggagcccgacctgaccgtccgcatcgtgcgcgacctgttcaccgaggacttcacc
gccctcgtcgtcgagggcaacggccagggcgaggacgcctgggacaccgtcgagggctac
gtcacgcacgtcgcgccgcacctcagcgagcggctgcgccgctgggaccgggagaccgag
ggcgacctgttcgacaagttccgcgtcaacgagcaggtgtccaaggcgctcgagcgcaag
gtgcatctgccctccggcggctcgctcatcatcgaccgcaccgaggcgatgaccgtcatc
gacgtcaacaccggcaagttcaccggcacgtcgggcaacctcgaggccaccgtcacctcc
aacaacctggaggcggccgaggaggtcgtccgccagctgcggctgcgcgacatcggcggc
atcatcgtcatcgacttcatcgacatggtgctgcccgccaaccgcgagctgctgctgcgc
cggctggtggagtgcctgggccgcgaccgcacccgccaccaggtcgccgaggtcacctcg
ctcggcctggtgcagatgacccgcaagcggatcggcaccggcctggccgaggcgttcacg
gtgagctgcgagacctgcaacggccgcggctaccacgtccacgacgcccccgtcgccacc
cagtctcccgccgacggcggggaccgcgaccacggccgccgccccagccgctcccgctcg
ggccgctcccgcggccgctccgacaacggcaagggctcggagtcgaacggcggcgaccac
gcggccgccggctccgccgcagccgactcctga
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