Propioniciclava coleopterorum: G7070_15490
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Entry
G7070_15490 CDS
T06483
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
prv
Propioniciclava coleopterorum
Brite
KEGG Orthology (KO) [BR:
prv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prv03019
]
G7070_15490 (hrpA)
Enzymes [BR:
prv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
G7070_15490 (hrpA)
Messenger RNA biogenesis [BR:
prv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
G7070_15490 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
Helicase_C
DEAD
HA2_C
OB_NTP_bind
AAA_22
HA2_N
AAA_19
AAA_30
nSTAND3
NACHT
SRP54
T2SSE
SLFN-g3_helicase
PhoH
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QIK73408
UniProt:
A0A6G7Y9T4
LinkDB
All DBs
Position
3252584..3256468
Genome browser
AA seq
1294 aa
AA seq
DB search
MGRGPVHWSVVPAAQPRIAFDPALPISGAVDEIRAALAGHQVVVVAGETGSGKTTQLPKI
ALAAGRKRIAHTQPRRIAARSVATRIASEMGVELGTAVGYQVRFTRQATKATAVKLMTDG
ILLAEIAHDRDLRAYDTIIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVIITSATIDTAR
FSEHFDDAPIIEVSGRTYPVEIVYEPLTDADDLAGGVAAAVKTLHALGDGDILVFCSGER
DIRDAADAIGALKLRNTEVLPLYARLSAAEQDRVFKPHEGLRVVLATNVAETSLTVPGIR
SVVDPGLARISRYSARTKVQRLPIEEISQASANQRSGRCGRVGPGIAIRLYDEEDFAARP
AFTEPEILRTNLASVILQMADARLGPIEDFPFVEPPDRSQVRDGLRLLRELGALADDEPG
RDGQRLTPTGRLLARLPVDPRLGRMLVEAGRRGVLAAMIPIVAALAIPDVRERPSDKQAE
ADTSHRRFWLPADAASGSDRDASDLAATWRLWRYLREQRRERSGNAFRRMCRDEFLNFLR
IREWQDLVTQLRDITKELELDEARAPRGGGRRGRGASEQRGRERSRPDAAGPDAEPDWDA
VHTSALAGLLSHVGLKETRGDDKTPQRRGRRPLAEYLGARGARFAIQPGSAAAKAEPPLV
AAVELVETTRLWGRTVVPVTAEMVEAVGAHLLVRQYGEPRWSASRGQVVADERVLLLGVP
IVAGRTVGYARVDPVVAREIFLRSALVEGQWRTRHHFFARNERARAEAQELEERTRRRDI
AADDDGIYAFYDRRVPTTVTGVVEFDRWWRDKRREEDRFLDFSVDDLIEDVSALDVSEFP
DSWTVGPTEVPVSYTFDPGAGRDGVSVEVDVSVLNQVDAAPFTWQVPGLRTELATELIRA
LPKAVRTRFVPAPDWARRALTWLDERPEWAQRPFPDAFAAALGGLSGGPVDPALFSLDAL
PEHLRVHYVITDGTKELGTGTDFEALRTRYAPRLNQRLNATSELTHAGATSWKFGVLPAT
TEIARRPTPLVGYPALVDQGDTVGVRVANTPEKAARWHALGLRRLIALDSPDPTRSVFAH
LSNPDRIALASGPYENLNALLADARLRAIADRLAALRLDPGEVRDEAAFVAAKDAVRPDV
AERMQAITRQAASVLSRATAVRSALAGQSGPSVSDARAQLDNLVFAGFIAATPEPHFTRL
DRYLHALANRVAAWRDNPAREAQHLETISALEDAYDAAIAGHPVGELPAAASEVGWLLEE
LRVSLFAQSLGTAQSVSAKRVRTAIAALAARRAD
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
gtggggcgcggccccgtacactggtcggtcgtgccagcagcccagccgaggatcgcgttc
gaccctgccctgccgatcagcggggcggtcgacgagatccgtgctgccctggcggggcac
caggtcgtcgtcgtggccggcgagaccggctcgggcaagaccacgcaactgcccaagatc
gcgctggcggcgggccggaagcggatcgcgcacacccagccgcgccgcatcgccgcgcgc
tcggtcgccacccgcatcgcctccgagatgggtgtcgaactgggcacggcggtgggctac
caggtgcggttcacccggcaggccaccaaggcgaccgccgtcaagctgatgaccgacggc
atcctgctcgccgagatcgcccacgaccgcgacctgcgggcctacgacacgatcatcatc
gacgaagcgcacgagcgctcgctcaacatcgacttcctgctgggctacctcaagcagttg
ctgccgcggcgtcccgacctgaaggtcatcatcacctcggcgaccatcgacacggcccgg
ttcagcgagcacttcgacgacgcgcccatcatcgaggtgtccgggcgcacgtaccccgtc
gagatcgtctacgagccgctgaccgacgccgacgacctggcgggcggggtcgcggcggcg
gtgaagacgctgcacgcgctgggcgacggcgacatcctggtgttctgctccggcgagcgc
gacatccgcgacgcggccgacgccatcggggccctgaagctgcgcaacaccgaggtgctg
ccgctgtacgcgcggctgtccgccgccgagcaggaccgggtgttcaagccgcacgagggc
ctgcgggtcgtgctggccaccaacgtggcggagacgtcgctgacggtgcccgggatccgc
tcggtggtcgaccccggcctggcccggatcagccgctactccgcccgcaccaaggtgcag
cggctgccgatcgaggagatctcccaggcctcggccaaccagcgctccggacgctgcggg
cgcgtcgggccgggcatcgcgatccggctctacgacgaggaggacttcgcggcgcgcccc
gcgttcaccgagccggagatcctgcgcaccaacctggccagcgtcatcctccagatggcc
gacgcgcggctggggcccatcgaggacttcccgttcgtcgagccgccggaccgctcgcag
gtccgcgacgggctgaggctgctgcgcgagctcggcgcgctggctgacgacgagcccgga
cgcgacggccagcgcctcaccccgaccggacgcctgctggcccgactgcccgtcgacccg
cggctcggccggatgctcgtggaggccggacgccgcggcgtcctggcggcgatgatcccg
atcgtcgcggcgctggccatccccgacgtgcgggagcggcccagcgacaagcaggccgag
gcggacacgtcgcaccgccggttctggctgcccgccgacgcggcgtccggctcggaccgg
gacgcgtccgacctggccgccacctggcggctgtggcgctacctgcgcgagcagcgccgc
gagcggtccggcaacgcgttccgccggatgtgccgcgacgagttcctcaacttcctgcgg
atccgggagtggcaggacctggtcacccagctgcgcgacatcaccaaggaactcgaactc
gacgaggcgcgcgccccgcgcgggggcggccgccgcgggcggggcgcgtccgagcagcgg
ggccgcgagcggtcgcgtccggacgcggcggggccggacgccgagcccgactgggacgcg
gtgcacacctccgcgctggcggggctgctctcgcacgtcgggctgaaggagacccggggc
gacgacaagaccccgcagcgccgcggccgccggcctctggcggagtacctgggcgcgcgc
ggggcgcgcttcgcgatccagcccggctcggcggcggcgaaggcggagccgccgctggtg
gcggcggtcgagctggtcgagacgacccggctctggggccggacggtggtgccggtcacc
gccgagatggtcgaggccgtcggcgcccacctcctggtgcggcagtacggcgagccccgg
tggtcggcctcgcggggccaggtggtcgccgacgagcgcgtgctgctgctgggcgtcccg
atcgtcgcgggccggaccgtcggctacgcccgcgtcgacccggtcgtggcgcgggagatc
ttcctccgctcggcgctcgtggagggccagtggcgtacccggcaccacttcttcgcccgc
aacgagcgcgcccgcgcggaggcccaggagctcgaggagcgcacccgccgccgcgacatc
gccgccgacgacgacggcatctacgccttctacgaccgccgcgtcccgaccacggtgacc
ggggtggtggagttcgaccgctggtggcgcgacaagcgccgcgaggaggaccggttcctc
gacttcagcgtcgacgacctcatcgaggacgtctccgccctcgacgtgtccgagttcccc
gactcgtggacggtcgggccgaccgaggtccccgtcagctacacgttcgaccccggcgcc
ggacgcgacggcgtgagcgtcgaggtggacgtgtccgtgctcaaccaggtcgacgccgcc
cccttcacctggcaggtgcccgggctgcgcaccgagctggccaccgagctgatccgcgcc
ctgcccaaggcggtccgcacccggttcgtgcccgcccccgactgggcgcgccgggccctc
acctggctcgacgagcgccccgagtgggcgcaacgccccttcccggacgccttcgccgcg
gccctgggcgggctgtcgggcggcccggtggacccggcgctgttctccctcgacgccctg
cccgagcacctgcgcgtccactacgtcatcaccgacggcaccaaggagttgggcaccggc
accgatttcgaggcgctgcggacgcggtacgccccccgcctcaaccagcggctcaacgcc
acctcggagctgacccacgccggcgcgacgtcgtggaagttcggcgtcctgcccgcgacg
accgagatcgcgcgtcggcccacgccgctggtcgggtatccggcgctggtcgaccagggc
gacaccgtgggcgtccgggtggccaacacccccgagaaggccgcgcgctggcacgcgctg
ggcctgcgccgcctgatcgcgctcgacagtcccgacccgacccggtcggtgttcgcgcac
ctgtccaacccggaccggatcgcgctggcgtccgggccgtacgagaacctcaacgcgctg
ctcgccgacgcccggctgcgcgccatcgccgaccggctcgccgcgctgcggctcgacccg
ggggaggtgcgcgacgaggcggccttcgtcgccgccaaggacgccgtccgccccgacgtg
gccgagcggatgcaggccatcacgcggcaggcggcctccgtgctgagccgcgccacggcc
gtccgctccgccctggccgggcaatccggccccagcgtctccgacgcccgcgcgcagctg
gacaacctggtgttcgccggcttcatcgccgccacgcccgagccgcacttcacccggctg
gaccgctatctgcacgcgctggccaaccgcgtcgccgcgtggcgcgacaaccccgcgcgc
gaggcccagcacctggagaccatctccgcgctggaggacgcctacgacgccgccatcgcc
ggccaccccgtgggcgaactgcccgcggcggcgtccgaggtgggctggctgctggaggag
ctccgggtcagcctgttcgcccagtcgctgggcaccgcgcagagcgtctcggccaagcgt
gtccgcacggccatcgccgctctggccgcgcgccgcgccgactag
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