Psychrobacter sp. PRwf-1: PsycPRwf_0003
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Entry
PsycPRwf_0003 CDS
T00541
Name
(GenBank) DNA polymerase III, beta subunit
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw03030
DNA replication
prw03430
Mismatch repair
prw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PsycPRwf_0003
03430 Mismatch repair
PsycPRwf_0003
03440 Homologous recombination
PsycPRwf_0003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prw03032
]
PsycPRwf_0003
03400 DNA repair and recombination proteins [BR:
prw03400
]
PsycPRwf_0003
Enzymes [BR:
prw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PsycPRwf_0003
DNA replication proteins [BR:
prw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PsycPRwf_0003
DNA repair and recombination proteins [BR:
prw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PsycPRwf_0003
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta_3
DNA_pol3_beta
DNA_pol3_beta_2
Motif
Other DBs
NCBI-ProteinID:
ABQ92963
LinkDB
All DBs
Position
2984..4159
Genome browser
AA seq
391 aa
AA seq
DB search
MQLSINRELLLKAINLIAKAADKRHNMVVLGNIKLEVTEQLLILTASDLEVELSAQVKLG
NGATGSIGATTLPASKLHEICKLLPKDTMINLAAESNERCVINSGKSRFVLGTLPAADFP
ILGNPANITPLTLSRNVLMDLMAKTQFAMAIQDVRYYLTGMLFEVSQRQLTTVATDGHRL
ALARSVIEVADDFSMQAILPRKAVIELERLANELGKLVGGNDGNLTLSFGREFLQVSLPF
GNVDSTGQIDDSVRVTFTARLIDGKFPDYRRVMPNNTDKIALANKEQMTDVLRRVSILSN
EKSRGVIFKFSQDGNVEVRANNAEQDEAVEALQVKYQGAPIELSFNAAYLQDVLDVLGGD
VQLHMSQANSSVLVNQLNDSQHQYVIMPMRI
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgtctatcaatcgtgaactgctcttaaaagccattaatctaattgctaaagca
gcagacaaacgccataacatggtcgttttgggtaacattaaactagaggttactgagcag
ctactgattttgacggcctcagatctagaagtagagctgagtgcacaagttaagcttggt
aatggtgccacaggtagtattggtgcgaccacgctgccggcatctaaattacatgaaatc
tgtaagctactgcctaaagacaccatgattaaccttgcagcggagagtaatgagcgctgc
gtgattaatagtggcaaaagccgttttgtactgggcacattgccagctgcagacttccca
atattgggtaatccggccaatattacgccgctcaccttaagccgtaatgtgctgatggat
cttatggctaagacgcagtttgcgatggccattcaagatgttcgttattaccttaccggt
atgttatttgaagtgtcgcagcgtcagctcaccacggttgccacagacggtcaccgtttg
gctttggctcgtagtgttattgaagtggcagatgattttagcatgcaggctattttaccg
cgcaaagcagttattgagcttgagcgtttggccaatgagctgggtaaattagtggggggt
aatgatggtaacctcaccttaagctttggccgtgagttcttacaagtaagcctacctttt
ggtaatgtggacagcacaggccagattgatgactcagtgcgtgtgacctttacggcacgc
ttaatagatggcaaattccctgattatcgccgagttatgcctaataatactgataaaata
gcactggctaataaagaacaaatgaccgatgtcttaagacgggtttctatcttaagtaat
gaaaagtcgcgcggggttatttttaaattctcgcaagatggcaatgtcgaagtacgtgcc
aataatgctgagcaggatgaagcagtcgaagccttacaagtaaaatatcaaggtgccccg
attgagttgtcgtttaacgcagcctatttacaagatgtactcgatgtcttaggcggcgat
gtgcaactacacatgagtcaagctaatagctcggtattggtaaatcagctcaatgacagc
caacaccaatacgtcattatgcccatgcgtatttaa
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