Psychrobacter sp. PRwf-1: PsycPRwf_0052
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Entry
PsycPRwf_0052 CDS
T00541
Name
(GenBank) DNA polymerase III, chi subunit
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw03030
DNA replication
prw03430
Mismatch repair
prw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PsycPRwf_0052
03430 Mismatch repair
PsycPRwf_0052
03440 Homologous recombination
PsycPRwf_0052
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prw03032
]
PsycPRwf_0052
03400 DNA repair and recombination proteins [BR:
prw03400
]
PsycPRwf_0052
Enzymes [BR:
prw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PsycPRwf_0052
DNA replication proteins [BR:
prw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PsycPRwf_0052
DNA repair and recombination proteins [BR:
prw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PsycPRwf_0052
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_chi
DUF5951
Motif
Other DBs
NCBI-ProteinID:
ABQ93012
LinkDB
All DBs
Position
complement(65071..65571)
Genome browser
AA seq
166 aa
AA seq
DB search
MQISFYVLGERYLNDNAAASSTASAANAEAVLNFVCRLTQTVLQKSEHSLVIIDDQVERL
KQLDTQLWSFDPVSFVAHDFILEEAAVSQLSAPVSLVSTLPKGFDGVILNLAATPLPLSV
ETTAAVLPERVLEIITPDEAGKQLGRDKYRAYQQLGFELNYFPINK
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattagtttttatgtgttgggtgagcgttatcttaacgataacgccgctgcatca
agcactgcctcagcggccaacgccgaggcagtgcttaactttgtgtgccgattgacccag
acggttttgcaaaaaagcgagcacagtttggtcatcattgacgatcaagtagagcgtctt
aaacagctcgatactcagctgtggtcttttgacccagtcagcttcgtcgctcatgatttt
atcttagaagaagccgctgtcagccagctgtcggcacctgttagcttggtatcaacgctg
cctaagggttttgatggcgttattttaaaccttgctgccactcctcttcccttatctgta
gaaacgacagccgctgtgctgccagaacgggttcttgaaatcattacccccgatgaggca
ggaaagcaacttggccgtgacaagtaccgtgcctatcagcaactaggctttgagcttaac
tattttccgatcaataaataa
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