Psychrobacter sp. PRwf-1: PsycPRwf_0159
Help
Entry
PsycPRwf_0159 CDS
T00541
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prw
Psychrobacter sp. PRwf-1
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prw03016
]
PsycPRwf_0159
Enzymes [BR:
prw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PsycPRwf_0159
Transfer RNA biogenesis [BR:
prw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PsycPRwf_0159
Prokaryotic type
PsycPRwf_0159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PseudoU_synth_2
TPR_Slam
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ABQ93118
UniProt:
A5WBS7
LinkDB
All DBs
Position
189456..190490
Genome browser
AA seq
344 aa
AA seq
DB search
MMTEEIIQSAPAAPLKKSRVSGVILIDKPQGLTSQQVVSKVKYLLKSPLHDSKKAGHTGT
LDPMATGLLPVCLGEATKFSHYQLDADKAYQATIKLGIQTDTGDAEGQSIATAAVPKLTA
AELEAVAQQFMGDIKQIPPMYSALKKDGKKLYEYARAGIEIDRPARPITIQAISLTLGAQ
SDELILNVTCSKGTYVRVLGEDIAAALGTLGHLTALRRTQVGHFDIAEAVSLEALEDLSH
EQRLAYLLGIDACINGIPTLEVSDSQCARLHMGQRLNIKPQLDEDITNYIQAMLSQRHSD
ADDSGKDEALDSVDIKLVNPKGEFLGLGAVELNGRLQPKKMIQR
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaagagatcattcaatcagcgcctgctgctccgctcaaaaaaagccgagtt
tcaggggttattttaatcgataagccgcaaggtctgacctcgcagcaggtggtatctaag
gttaagtatctgcttaagtcacctttgcacgacagcaaaaaagccggtcatactgggact
ctagatcctatggcgaccggcttattgcctgtatgcttaggggaggcgactaagtttagt
cactaccagcttgatgctgataaggcgtatcaggccactattaagcttggcatacaaacc
gatactggagatgcagaagggcagagcattgctaccgcggctgtacctaagctaactgcg
gctgagctagaggctgtggcgcagcagtttatgggagatattaaacaaataccgcccatg
tattctgcgctaaaaaaagacggaaaaaaactgtatgagtatgcccgcgccggtattgag
attgatcgtccggcacggcctatcactattcaagcaataagcttaaccttgggcgcgcag
tccgatgagctgattttaaatgtcacttgctcaaaaggcacctatgttcgagtgctggga
gaagacattgccgcagcgttaggcacgcttgggcatttaactgctctgcgccgtactcaa
gtgggacattttgatattgccgaagcagtaagtcttgaggcgcttgaggatctatctcac
gagcagcgcttggcttatttattgggtattgatgcctgtatcaatggcataccgaccctt
gaggtgtctgacagtcagtgtgctcgcctgcatatggggcaacgtcttaatatcaagcct
cagcttgatgaggacatcactaattatatacaggccatgttaagtcaacggcacagtgat
gcagatgatagtggtaaggacgaggcattagattcagtagatatcaagcttgtgaaccct
aaaggcgagtttttaggcttgggggcagtagagctaaatggccgcttacagcccaaaaaa
atgattcaacgttaa
DBGET
integrated database retrieval system
