Psychrobacter sp. PRwf-1: PsycPRwf_0164
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Entry
PsycPRwf_0164 CDS
T00541
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PsycPRwf_0164
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prw03019
]
PsycPRwf_0164
03016 Transfer RNA biogenesis [BR:
prw03016
]
PsycPRwf_0164
Enzymes [BR:
prw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PsycPRwf_0164
Messenger RNA biogenesis [BR:
prw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PsycPRwf_0164
Transfer RNA biogenesis [BR:
prw03016
]
Prokaryotic type
tRNA degradation factors
PsycPRwf_0164
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
Band_7_1
OB_RRP5_4th
S1_RRP5
S1_2
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ABQ93123
UniProt:
A5WBT2
LinkDB
All DBs
Position
193089..195203
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AA seq
704 aa
AA seq
DB search
MSMFNTISREFQYGNEQVVIETGRIARQANSVLVHMGGVSVLVAVVVKSDAKEGQNFFPL
TVNYQEKMYAAGKIPGAYGKREGRPTEFETLTSRLIDRPIRPLFPEGYVNEIQITATVIS
SDKKHYADIAAMIGASAALSISDAPFNGPIGGARVGFINGEYVLNPSIEELKSSDLDLVV
AGTKSAVLMVESEAAELSEDQMLGAVLYGHEQQQIVIDNIAELAKAVGTQKQDFVAPELN
AELKEKVTTQFGEQVAEAYAISDKQARYEKLDEIKAAAIDALAGDPESEEFAEKEAQIKE
IYNDLKYRTVRDAILSGKPRIDGRDLDTVRALDIQVGVLPYTHGSALFTRGETQALVTTT
LGNSRDVNLIDSLAGTIQDHFMLHYNFPHYSVGETGREGVPKRREIGHGRLARRGVQAML
PDSDRFPYVIRVVSEITESNGSSSMASVCGASLALMDAGVPLKAPVAGIAMGLVKEGDRF
AVLSDILGDEDHLGDMDFKVAGTKDGITALQMDIKIEGITSDIMEKALEQAHAGRIHILN
AMNEVLPASRTEINAHAPNYAVIEINSDKIRDVIGKGGATIRQLTEDTGAVIDIDDNGTI
RIFGENKAATKEAIRQIEAITAEVEVGKVYKGTVARVVDFGAFVTVLPGTDGLVHISQIA
DERVESVSDYLSEGQQINVLVQDVDNRGRIKLTMKGVEQEQTQA
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgtttaataccatctctcgagagttccagtacggcaacgaacaagttgttatt
gaaaccggtcgtatcgcacgacaagccaattcagtattggttcatatgggcggcgtatca
gtattggtcgctgtggttgtaaaaagcgatgctaaagaaggtcaaaacttcttcccgcta
accgtcaactatcaagaaaaaatgtacgctgctggtaaaattccaggcgcttacggcaaa
cgtgaaggccgtcctactgagtttgaaaccctaacctcacgtctcattgaccgtcccatc
cgtcctttattcccagaaggttatgtcaacgagatccagattactgccacagtcatctca
agtgacaaaaagcactatgctgatatcgctgccatgattggtgcttcagctgcactttca
atctcagatgcgccgtttaatggccctattggtggtgcccgcgtaggctttatcaatggc
gaatacgtgcttaacccctcaattgaagagttaaagagcagtgatcttgacttagtagtg
gcgggtactaaatcagcggtattaatggttgagtcagaagctgctgagctgtctgaagac
caaatgctgggcgctgtattgtacggtcatgaacagcagcaaattgttatcgataatatt
gctgagctggccaaggccgtgggaactcaaaaacaagactttgtggcacctgagctaaat
gctgagttaaaagaaaaagtaaccacacagtttggtgagcaagtggctgaagcttatgcc
attagcgataagcaagcacgctacgaaaaactagatgagatcaaggctgcggctattgac
gccttagcaggtgaccctgagtcagaagagtttgctgaaaaagaagctcaaattaaagaa
atctataatgatctaaaatatcgcaccgttcgtgacgccattttgtcaggtaagccacgt
atcgatggtcgtgatttagataccgttcgtgcgctagatattcaagtaggtgtattgcct
tacactcatggttcagcgctatttacccgtggtgagacgcaagctctagtcaccacgact
ttaggtaattcacgtgatgtaaacttgattgactcgctagcgggtactatccaagatcat
ttcatgctgcattacaacttcccgcattattcagtgggtgaaactggccgtgaaggcgtg
ccaaagcgtcgtgaaattggtcatggccgtctggctcgccgtggtgttcaagccatgctt
ccagacagcgaccgcttcccatacgttatccgtgtggtgtctgagattactgaatcaaat
ggttcgtcttcaatggcgtcagtttgtggtgccagccttgccttaatggatgccggtgtg
ccgttaaaagccccagtagctggtatcgctatgggtctggtcaaagaaggcgaccgcttt
gctgtcttatcagatatcctaggtgatgaagatcatttaggtgatatggactttaaagtg
gccggtactaaagatggtatcacagccttacagatggatattaagattgaaggtatcacc
tcagatatcatggaaaaagcacttgagcaagctcatgccggccgtatccatatcttaaat
gccatgaacgaagtattgccagccagccgtactgaaatcaatgcccatgcaccaaactat
gcggtcatcgaaatcaattctgataaaatccgtgatgtgatcggtaaaggcggcgcaacc
atccgtcaattaaccgaagacaccggtgcggttatcgatattgatgacaatggtaccatt
cgtatctttggtgaaaacaaagccgcgaccaaagaagccatccgtcaaatcgaagccatc
accgctgaagtggaagtgggcaaagtatacaaaggcaccgttgcgcgcgttgtagacttt
ggtgcattcgtaacggttttaccaggtactgatggtctggtacacatctcacaaatcgct
gatgagcgtgtagagagcgtatcggattacctaagtgaaggccaacaaatcaatgtgttg
gtgcaagatgtagacaaccgtggtcgcatcaaattaaccatgaaaggcgttgagcaagag
cagactcaagcttaa
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