Psychrobacter sp. PRwf-1: PsycPRwf_0348
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Entry
PsycPRwf_0348 CDS
T00541
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw00300
Lysine biosynthesis
prw00470
D-Amino acid metabolism
prw01100
Metabolic pathways
prw01110
Biosynthesis of secondary metabolites
prw01120
Microbial metabolism in diverse environments
prw01230
Biosynthesis of amino acids
Module
prw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
prw_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PsycPRwf_0348
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PsycPRwf_0348
Enzymes [BR:
prw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PsycPRwf_0348
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
AP_endonuc_2
LysM_RLK
Motif
Other DBs
NCBI-ProteinID:
ABQ93303
UniProt:
A5WCB2
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All DBs
Position
419924..421261
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AA seq
445 aa
AA seq
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MSNPDLSQAAVQHSESGLRINPEVFVKKLPTLSYQQGTLFVEQASVQQLAEQYGTPLYVY
SKQAILDAYTAYTTSFAAIDHQVCYAVKANSNLAVLSVLAKAGAGFDLVSSGELARVLAV
GADPSKIVFSGVGKTVTELTAALKAGIGCFNVESLSELDTLNAVAAELNVKAPISIRVNP
DVDAKTHPYISTGLKDNKFGISHDIAVAAYQHAASLEHLQIVGIDCHIGSQLTEIDPFVA
ALDKVCELIEALKQVGIELQHIDLGGGLGVIYIDEEVAKVSEFAAALLPKLQELGLKVFF
EPGRSIVANAGMLVTKVEVLKPTEHRDFAIVDAAMNDLIRPALYQAEMAVIPVQTASQAS
QKSWDIVGAVCETGDFLAKKRLLSLAVGDILAITGAGAYGFVMSSNYNSRPRPAEVMVSG
DKHQVVRARETVAQLFETESTFDID
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaccccgacttatctcaagccgccgtacaacatagcgaatctggtctacgcatc
aatcctgaagtctttgtcaaaaaactgcccactttaagctatcagcaagggaccttgttt
gtggagcaagcctctgtacagcagttggctgagcagtatggtacgcctttgtatgtgtat
tcaaagcaggcaattttggatgcttatacggcatacactaccagttttgcagccattgac
catcaggtctgctatgcggtcaaagccaactcaaacttagcggtgttgtcagtattggcc
aaagccggtgcaggctttgatttggtgtcctcaggggagctggctcgagtactggccgtg
ggcgctgaccccagtaaaattgtattctcaggtgtgggcaaaaccgtcactgaactcaca
gcggcgcttaaagcaggtattggctgctttaacgtagagtcattaagtgagcttgatacg
ctaaatgcggtggcagcagagctgaatgttaaggcgccgatctccattcgggtcaaccca
gatgtcgatgccaaaacccatccttatatttcaaccggcctaaaagacaataaatttggt
atcagtcatgacatcgctgtggcagcatatcaacatgccgcaagcttagagcacttacag
attgtcggtattgactgccatattggctcacagttgaccgaaattgatccgtttgtggcc
gctttggataaggtgtgtgagctgattgaagcgctcaaacaagtaggtattgagctacag
cacattgatttgggcggtggtttgggcgttatctatattgatgaagaggtggctaaggtc
agtgagtttgccgccgctttattaccaaaactacaagagcttgggttaaaagtatttttt
gagccgggtcgcagtattgttgccaacgctggcatgctggttaccaaggttgaggtgtta
aaacccactgagcatagagactttgctattgttgatgcggccatgaatgatttaattcgt
ccagcgctgtatcaagccgaaatggcggtcattccggtacaaacagcgtcgcaagcatca
cagaagagctgggatattgtcggtgctgtgtgcgaaaccggcgactttttggccaaaaaa
cgtctgttaagcctagcggttggcgatatcttggccattactggtgctggcgcttatggc
tttgtgatgagtagcaactacaattcgcgcccacgtcctgctgaagttatggtgtcaggg
gataagcaccaagtggtacgcgcccgtgagaccgtagcacagttatttgagacggaatca
acgtttgatatagattaa
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