Psychrobacter sp. PRwf-1: PsycPRwf_0349
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Entry
PsycPRwf_0349 CDS
T00541
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw00300
Lysine biosynthesis
prw00470
D-Amino acid metabolism
prw01100
Metabolic pathways
prw01110
Biosynthesis of secondary metabolites
prw01120
Microbial metabolism in diverse environments
prw01230
Biosynthesis of amino acids
Module
prw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PsycPRwf_0349
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PsycPRwf_0349
Enzymes [BR:
prw01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
PsycPRwf_0349
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Paralog
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
ABQ93304
UniProt:
A5WCB3
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All DBs
Position
421543..422424
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AA seq
293 aa
AA seq
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MLIEFTKMHGLGNDFMVIDLVTQRLELTPELITLLADRNLGIGFDQLLVVEPPMRPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVQARKLSFKQRIRVETKSGILTLSTDNYGWVEVDM
GKPRFEPAEIPFTPKAITKIQNAYHLDVEGTPVQLYVANMGNPHAVIKVDDILTADVEKL
GKAIESHPAFPERVNVGFMQVMNQRHIRLRVYERGVGETQACGTGACAAVATGIREGWLD
EGEEIRAQLYGGSLLIRWSPGYSVMMTGPTAFVYEGVFSPDGIMAQAGLKPLS
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcttatagagtttacaaaaatgcatgggctgggcaatgactttatggtcattgacttg
gtcactcagcgtttggagctgacaccagagctgattacattattggctgatcgtaactta
ggtattggcttcgatcagctgttggtggttgagccacccatgcgtccagatgttgatttt
cgctaccgcatctttaattcagatggtagtgaagtggagcaatgtggtaatggggcacgc
tgttttgcccggtttgtacaggcgcgcaaactgtcattcaagcagcgtattcgggttgaa
accaagtcaggtattttgacgttatcgaccgataattacggctgggtagaggtggatatg
ggcaagccgcgctttgagccggcagagatcccttttacgcccaaagccattactaaaata
caaaacgcttatcacctagatgtcgaggggacgccggtacaattgtatgtggccaatatg
ggcaacccacatgcggttattaaggtcgatgatatcttgacggccgatgttgagaagctt
ggcaaagccattgagtcgcatccggcatttcctgagcgggtcaatgttggctttatgcag
gtgatgaaccagcgtcacattcgtctgcgtgtctatgagcgcggtgtgggcgagacccaa
gcttgtggtacaggtgcttgtgcggcggtcgctacaggcattcgcgaaggctggctggat
gagggcgaggagattagagcgcagctttatggcggcagtttactgattcgctggtcacct
ggctattctgtgatgatgaccggcccgaccgctttcgtctatgaaggtgtgtttagtcct
gatggtattatggcgcaggccggtcttaagccattaagctag
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