Psychrobacter sp. PRwf-1: PsycPRwf_0450
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Entry
PsycPRwf_0450 CDS
T00541
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PsycPRwf_0450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prw03021
]
PsycPRwf_0450
03400 DNA repair and recombination proteins [BR:
prw03400
]
PsycPRwf_0450
Enzymes [BR:
prw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PsycPRwf_0450
Transcription machinery [BR:
prw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PsycPRwf_0450
DNA repair and recombination proteins [BR:
prw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PsycPRwf_0450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF7219
Motif
Other DBs
NCBI-ProteinID:
ABQ93405
UniProt:
A5WCL4
LinkDB
All DBs
Position
535598..536605
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AA seq
335 aa
AA seq
DB search
MMLNATEFLTPNAINVDAVDETNAKVTLEPLERGFGHTLGNALRRILLSSLPGAAVIEAE
IEGVDHEYSTLEGLQEDVLDLLLNLKGLAITMHDQNEVFLTLDKKGPGIITAADIELPHN
VDIVNPELVLGTLGDRGHLKMRLRVVMGRGYEPANLRREDGDTKAIGRLKLDASFSPVSR
VAYQVENARVEQRTDLDRLIIELETNGTIDPEEAIRKAATILQQQISIFVDLEAEEAPEP
VKEKEEVDPVLLRPVDDLELTVRSANCLKAENIYYIGDLVQRSETELLKTPNLGKKSLTE
IKDVLASKGLELDMRLENWPPADLRVDDRFSYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaaatgctaccgagtttctgacccctaatgccattaatgtggatgcggttgac
gaaaccaatgcaaaagtcacgctcgagccgttagaacgcggctttgggcataccctaggt
aatgcccttcgtcgcattcttttatcttcattgcctggtgcagcggttattgaagcagaa
atcgaaggagttgatcatgaatattcaactcttgaaggtctgcaagaagacgttttagat
ttattgttaaatctaaaaggtcttgcgattactatgcacgatcaaaatgaagtgttttta
acactagacaaaaaaggtcctggcattatcactgcggcagatatcgaactgccacacaat
gttgatattgttaaccctgaattggttctaggtacgctaggtgaccgtggtcatctaaaa
atgcgcttacgtgtggttatgggtcgtggttacgagcctgctaacctacgccgtgaagat
ggtgacacgaaggccattggtcgcttgaaattggatgctagctttagcccagtttcacgt
gtggcttatcaagttgaaaatgctcgtgttgaacagcgcacggatcttgaccgtctgatc
attgaactagaaaccaatggcacgatcgatcctgaagaagcaattcgcaaagcagcaact
attttgcagcaacaaatctctatttttgtagatttagaagcagaagaagcgccagagcct
gtgaaagagaaagaagaggttgaccctgtactattacgtccagtggatgaccttgaacta
acggttcgctcagccaactgtttaaaagctgaaaacatttactatatcggcgatttggtt
cagcgttcagagactgaactgcttaaaacaccaaaccttggtaagaaatcattaaccgaa
attaaagacgttttagcgtctaaaggtcttgaactggatatgcgcctagaaaactggcca
ccagcagatctacgtgttgatgaccgtttttcttaccgtagccgttaa
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