Psychrobacter sp. PRwf-1: PsycPRwf_1183
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Entry
PsycPRwf_1183 CDS
T00541
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw00061
Fatty acid biosynthesis
prw00071
Fatty acid degradation
prw01100
Metabolic pathways
prw01212
Fatty acid metabolism
prw02024
Quorum sensing
prw04146
Peroxisome
Module
prw_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PsycPRwf_1183
00071 Fatty acid degradation
PsycPRwf_1183
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PsycPRwf_1183
09145 Cellular community - prokaryotes
02024 Quorum sensing
PsycPRwf_1183
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
prw01004
]
PsycPRwf_1183
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
prw04147
]
PsycPRwf_1183
Enzymes [BR:
prw01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PsycPRwf_1183
Lipid biosynthesis proteins [BR:
prw01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PsycPRwf_1183
Exosome [BR:
prw04147
]
Exosomal proteins
Exosomal proteins of breast milk
PsycPRwf_1183
Exosomal proteins of breast cancer cells
PsycPRwf_1183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DnaA_N
Motif
Other DBs
NCBI-ProteinID:
ABQ94132
UniProt:
A5WEP1
LinkDB
All DBs
Position
complement(1445006..1446688)
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AA seq
560 aa
AA seq
DB search
MNKFWTEFYPEGVAKELPPLNQSLNDFFDDTLTKFAKNKFMTNMGVSYTYAEVDQMSKNI
AAWIQTLGLAQGSTVGIMMPNVNQYLPIVIGALRAGMVLTLINPLYTSRELKHQLIDADA
KIIFILEPFTHGLDSIIDKTPVETVVVSAIGDMLGTAKGALINLAAKHLKKAVPNYDLSS
CSKCQEVSFKAVLKQGKKLKYTRCDSKPDDLALIQYTGGTTGTAKGILITHHNVVYGTKQ
YDEWFKPLNYDANKDGQLTSVIALPLYHIFAFIISLLGFRTGQHFLLVTNPRDINAFVKL
LKKEPFHLLPAVNTLFQALLNHPEFKSVDFSNLKLSLAGGMAATPEMARKWLDTTGIPIH
EGWGMSETLGVGTANPLTNKEFTGTIGMPVPGVDIKIFDDEENVLGVGEEGEIGIKGMNV
IKGYHNLDNSKFFTKDGYLKTGDVGAIDDKGYVKLFDRKKDMLIVSGFNVYPNEIEGVVE
MHPKVRECSVVGVEDELQGQSVKLFVVSDHSSLTKKELFEFCKKNLAAYKCPRHIEFIDE
LPKSTVGKILRHKLRAKSNR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaataagttttggactgagttttatccagaaggtgtcgccaaggagctgccccctctc
aaccaatcattgaatgacttcttcgatgataccttaacaaaatttgccaaaaataagttt
atgaccaatatgggcgtgtcatatacctatgccgaagtcgatcagatgtctaaaaacatc
gctgcatggattcagactctaggattggcacaaggctcaacggttgggattatgatgcct
aacgttaatcagtacttgcctatagttattggcgctttacgcgcaggtatggttctaact
ttaatcaaccctctgtacacctcacgagagctaaaacatcaactgattgatgccgatgcc
aagattatttttattctagagcctttcacccatggcctagactctattattgataagacc
cctgttgaaaccgtcgttgtcagtgccattggtgacatgttaggcacagcaaaaggcgct
ttgattaacctagccgccaaacacctcaaaaaagcagtgcctaactatgatctatcaagc
tgctcaaagtgccaagaagttagctttaaagcggtgttaaaacaaggcaaaaagctcaaa
tacacccgttgtgatagcaagcctgatgacttagctttaattcaatataccggcggcacc
acaggcacggccaaaggaatattgatcactcatcataatgtggtctatggcaccaagcag
tatgatgaatggtttaagccgttaaattatgacgccaataaagacggtcagttaacctca
gttattgcccttccgctgtatcatatctttgcttttattatctctttactcgggtttcgt
accggacaacacttcttacttgtcaccaatccgcgtgacattaacgcctttgtcaaattg
ctaaaaaaagaaccatttcatctactgccagcagtgaacaccttattccaagcactgtta
aatcatcctgaatttaaatccgttgatttttcaaacttaaaactgtctttggcaggtggt
atggcggcgacacctgaaatggcacgcaaatggctagatactactggcatccccattcat
gaaggatgggggatgtcagagaccctcggcgtgggtactgccaatcctttaactaataaa
gaatttaccggtacgattggtatgcctgtcccaggcgttgatattaagatatttgatgat
gaagaaaatgtactgggtgtgggcgaagaaggggagattggcattaaaggcatgaatgtc
attaaaggctatcacaacctagataacagtaagttttttaccaaagatggctatctgaaa
acaggcgatgtgggcgctatcgatgacaaaggctacgttaagctctttgatagaaaaaaa
gacatgctcattgtcagcggctttaatgtctatcctaatgaaattgaaggtgttgtggag
atgcatcctaaagttagagaatgctcagtggtgggtgtggaggatgaactacaaggccaa
tctgtaaaattatttgtggtatctgaccactcaagcttaaccaaaaaagagctctttgaa
ttttgtaaaaagaatctagccgcttataagtgccctcgtcatattgagtttatcgatgag
ctgcctaagtctacagtaggtaaaatcttaaggcataagcttcgtgcgaagagtaatcgt
tag
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