Psychrobacter sp. PRwf-1: PsycPRwf_1454
Help
Entry
PsycPRwf_1454 CDS
T00541
Name
(GenBank) DNA polymerase III, gamma subunit
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw03030
DNA replication
prw03430
Mismatch repair
prw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PsycPRwf_1454
03430 Mismatch repair
PsycPRwf_1454
03440 Homologous recombination
PsycPRwf_1454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prw03032
]
PsycPRwf_1454
03400 DNA repair and recombination proteins [BR:
prw03400
]
PsycPRwf_1454
Enzymes [BR:
prw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PsycPRwf_1454
DNA replication proteins [BR:
prw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PsycPRwf_1454
DNA repair and recombination proteins [BR:
prw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PsycPRwf_1454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_18
AAA_5
AAA_22
TIP49
AAA_30
PIF1
AAA_14
AAA_19
Rad17
AAA_2
nSTAND3
TsaE
AAA_7
AAA_16
Mg_chelatase
AAA_assoc_2
RsgA_GTPase
AAA_24
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABQ94399
UniProt:
A5WFF8
LinkDB
All DBs
Position
complement(1781069..1783324)
Genome browser
AA seq
751 aa
AA seq
DB search
MSQQYQVLARKYRPKNFHELVGQSHVSKALINAIDHNRLHHAYLFTGTRGVGKTTIARIL
SKCLNCETGVTSTPCGVCSSCVAIDQGRFIDLIEIDAASRTKVEDTRELIDNVPYAPTQG
RYKVYLIDEVHMLSTHSFNALLKTLEEPPAHVKFLLATTDPQKLPITIISRCLQFVLRPL
PQQALSDHIANLLTQENIDFTQPALWQLANAAKGSVRDALSLTDQAIAFGQGRLTDETVN
DMLGLIDSADLISLLLDIYQGNAPALSAHIEQMRAQLVDAGSMFDGLADLLHQIAMVQLL
PNVSLNVNDLQAQQITALAAQIGPDVLQLYYQIVIQGREQIKLANTPLQALEMCLLRLLA
FRPLALNEVAVASSNTPAHKASSDQPASIEMQAPNPHADQAEDYLTEQALSATSTESMAD
TNIEPQSPNVNDADINNTANIDVKTHQDDYQLSSTSGADINPASLNETDFATPLASEPTA
QDTRPQLEEQAVDIKEYSDFDGDYQNNSNYLSTNTSLERKSDLELRLSKSALDSEPLISV
DQEDQVKTKDSSSVTSLSSAQPTENSHPEAEHAATVNSVISNTVEHQDPQITLSAEDPRS
LLKCPEQTLEGEWTPDKWDYWLQTARESGALAQDQLAMARQGVMTGEISGRSEFKVAFDT
KNMQSIFQHLANHLTQQFGAQVSIAIDTSLSSEQAELLPQSRQKNREIQAKNYAQELITN
SPVMQRLIHDAQGKITSLKLFEVEKNPQKNC
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagcaatatcaagttttagcacgtaagtatcgtccaaagaacttccacgagttg
gttgggcagtcacatgtgtctaaagccttaattaatgccattgatcataatcggctacac
catgcctacttatttactgggactcgcggagtgggtaagaccaccatcgcccgtattttg
tccaagtgtctaaactgtgaaactggagtaaccagtacgccttgtggggtttgtagcagc
tgcgttgctattgatcaaggccgctttattgacttaattgagatcgacgccgcctctcgc
accaaggtagaggatacgcgtgagcttattgataatgtgccttatgcgcctactcaaggt
cgatacaaagtttatctaatcgacgaagtgcacatgctctcaacccacagctttaatgct
ctattaaagacattagaagagccgccagcgcatgttaagtttttattggccaccacagac
ccccaaaagctgccaatcaccattatcagtcgctgcctacaatttgtactgcgaccgtta
ccgcagcaagcgcttagtgaccatattgctaatttgttgactcaagaaaacattgatttt
acgcagccagcgttatggcagttggccaatgctgcaaaaggctcggtgcgtgatgccttg
tctttaaccgatcaagccattgcgtttggtcaaggtcgattgaccgatgagacggttaat
gacatgttggggcttattgatagtgcagacttaattagcctattactggatatctatcaa
ggtaatgcgcctgcgctctcagcgcacattgagcagatgcgggcgcagttggtcgatgca
ggcagtatgtttgatggactggctgatttattgcatcaaattgctatggtgcagctgctg
cctaatgtctcactcaacgtcaatgacctgcaagctcagcagattacagcattggcggcg
cagattggtccggatgtcttgcagctatattatcagattgtcattcaaggccgtgagcaa
attaagcttgccaatacacccttgcaagcgcttgagatgtgcttattaagattgctggcc
tttagaccgctggcgctaaatgaagtggcggtggcgagctcaaacacacctgcgcataaa
gcatcctctgaccagccggcgagtatcgagatgcaggcaccaaatcctcacgctgaccag
gctgaagattacctaactgagcaggccttatccgccacaagcactgagtctatggcggat
acaaatattgagccacaatcgcctaatgttaatgatgctgatattaataatacagcaaat
atcgatgttaaaacccatcaagacgattatcaactgagcagtacatctggtgctgatatc
aatcctgcgtcattgaatgaaacagattttgccaccccattagcttctgagccaacggct
caagatactaggccgcaattagaggagcaagctgttgatattaaggaatattctgatttt
gatggtgactatcaaaataatagtaattatttatcaactaatacttcccttgagagaaaa
agtgatttagaattacgcctttccaaatcggcgctcgactcagagccgctaatctctgta
gaccaggaagatcaagtcaagacgaaggacagttcatcagttacatcattatcgtcagcc
cagcccactgaaaactcacacccggaagccgaacacgcggcgacggttaattcagtgatt
tcaaatactgttgaacatcaagatccgcagatcactttatctgctgaggatccgcgtagt
ctattaaaatgcccggagcaaactttagagggcgagtggaccccagataaatgggactat
tggttacaaaccgctcgtgaatcaggtgccttggcgcaggatcagctggcaatggcccga
caaggggttatgactggtgaaattagtggccgtagcgagtttaaagttgcctttgatacc
aaaaacatgcagagcatttttcagcatttggccaatcatttgacgcagcaatttggggca
caagtatcgattgccatcgatacctcattaagctcggagcaagctgagcttttgccacaa
agcagacaaaaaaatcgtgaaattcaggccaaaaattatgctcaagagctcatcactaac
agtcccgtgatgcagcgtcttatccatgacgcacaagggaaaataaccagtttgaagctt
tttgaggtcgaaaaaaacccacaaaaaaattgttaa
DBGET
integrated database retrieval system
