Psychrobacter sp. PRwf-1: PsycPRwf_1534
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Entry
PsycPRwf_1534 CDS
T00541
Name
(GenBank) transcriptional regulator, IclR family
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PsycPRwf_1534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prw03000
]
PsycPRwf_1534
Transcription factors [BR:
prw03000
]
Prokaryotic type
Helix-turn-helix
IclR family
PsycPRwf_1534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
TrmB
Dimerisation
HTH_24
BRCT_3
Penicillinase_R
DUF742
TFIIE_beta
TFIIE_alpha
Motif
Other DBs
NCBI-ProteinID:
ABQ94475
UniProt:
A5WFN4
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All DBs
Position
1876787..1877566
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AA seq
259 aa
AA seq
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MKDNTSKPSVSVPAIDKMCLILDLITEANYPLTSAEIASQLSLPKSSTHNILQSLLAKHL
VFKDRDNRFHLGSYLLYWAGKYEKQHSIIDVFHEVIVNHPTLLQHTVTLSKIDGKEVVFL
ACHESPAPLGFTFRSGVRVPAPFSATGKAMLSTYDNSTITQLFEQQMPAPYTSRSVQQLD
VLLKELQQVRDTGISLDDGQLREGMYCLGTCVVDTEGQPIAGMAISFVKEEYEKQREGVS
QALLALAKDISQRLGVSSH
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagacaatacctctaagccctctgttagcgtacctgccatagataaaatgtgcctt
attttggatctgattacagaagccaattacccacttacctcagctgaaatcgcgtcgcaa
ttgtcacttcccaaaagtagcacccacaatatcttgcaaagtctattggccaagcatttg
gtgtttaaagaccgtgacaaccgttttcatttggggtcttatctgttgtactgggctggc
aagtatgaaaagcagcacagtattattgatgtctttcacgaggtcattgtcaatcacccc
acgctattgcagcacacggtgaccttatcgaagattgatggcaaggaggtggtgttttta
gcctgccatgagtcgccagccccactaggttttacctttcgctcaggggtgcgagtgcct
gcgcctttttctgccactggcaaagccatgttatccacttatgacaatagcaccataact
cagctgtttgagcagcagatgccggcgccatatacctcaagaagtgtgcagcaattggat
gtgctacttaaagagttgcagcaggtgcgtgataccggcatctcacttgatgatggtcag
ctgcgagagggtatgtattgtctgggaacctgtgtggtcgatacggaaggacagccgatt
gctggtatggccatcagcttcgttaaagaggagtatgaaaaacagcgcgagggcgtcagc
caagccttactggccttggccaaagacatctcccagcgccttggcgtcagcagccactaa
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