Psychrobacter sp. PRwf-1: PsycPRwf_1620
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Entry
PsycPRwf_1620 CDS
T00541
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw00550
Peptidoglycan biosynthesis
prw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PsycPRwf_1620
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
prw01003
]
PsycPRwf_1620
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prw01011
]
PsycPRwf_1620
Enzymes [BR:
prw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
PsycPRwf_1620
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PsycPRwf_1620
Glycosyltransferases [BR:
prw01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
PsycPRwf_1620
Peptidoglycan biosynthesis and degradation proteins [BR:
prw01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
PsycPRwf_1620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
ABQ94561
UniProt:
A5WFX0
LinkDB
All DBs
Position
2003947..2006592
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AA seq
881 aa
AA seq
DB search
MGIYRLLDGNYIEKKAVFSHYNRVFFYVGKTIVHHKPSRASSHFDQSSAQFSKSSFSEGK
LPNPQQQRGSVIGFFLLIIIIVGMLMLAMYLIKQDRVITAKFEGKRWNLPAKVYSQPLEL
YQGAALTNKNLDAWLEMLNYKSSSNYNNTGTYNKSSGQYVIHTRGFQYSANDVDPEQVIK
IKIQDSKVTSIQSTEPNDTGIVRIEPVTIGGIYPDNNEDRIVLPIDEIPQPLIDALIATE
DRGFYEHKGVSLKGIGRALYNNLKGGSMQGGSTITQQLIKNFYLSSDRTFKRKANEAVMA
LLLEMHYSKDQILQTYLNEINLGQNGNRSINGFGLAAQFYFNKPLKELRIDQQAMLVGLA
KGTSYYNPRRNPERALNRRNTVLANMLETGKIDQATYDDAIAQKLDVVPKPSVGKSRFPD
FLDIVKRELHDNYHPDDLKNEGLRVFSTLDPIAQMSADAAVQKQLSGLRKSSSKTKGLQA
ALVSANPASGELIAAVGSGSEFTGFNRAIDAKRQVGSLLKPFIYMTALQSGKYNLASPVS
DNPVTLTLPDNTTWTPKNYDGRDHGYVPLTTALAKSYNQAAVNTGIEFGVGPFVDQLHRL
GIKEKIPTYPSLFLGSVELSPMDMLGMYQVMAAGGFRTPIISIRSVVDDRGQILQRSGLD
TKRSVPPDVNYLTNYALQEVVRSGTASSLKSLGSDLNLAGKTGTTNDYRDSWFAGYSGNY
VSVVWVGRDDNKPIGLSGGSGALPVWKDFMGRLRLTPVELVQPDSVEWLWLENGTGKLSH
ESCDNARYLPVLSRYLPEEASDCALAIYEQEQARQRQQWFNDQRKALLDQSRQLDSVQEG
MPANTDSSANDDASAGNAPEQEGSEPTNNGDTWYDKALQWF
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgggcatatatcggctattagatggcaattacattgaaaaaaaggcggttttcagtcat
tataatcgggtctttttttatgttggtaaaactatcgtgcatcacaaaccctctcgcgct
tcttctcattttgaccaatcatctgcacaattctccaagtcctcgtttagcgaaggcaaa
cttcccaacccgcagcagcaacgcggctcagtgattggcttttttttactgattatcatc
attgtcggtatgttgatgctggccatgtatttgatcaagcaagaccgcgttattactgcc
aaatttgagggcaaacgctggaacttgccagccaaggtgtactcgcagcctttagagctt
tatcaaggggcagccctcaccaacaagaacttagatgcttggcttgagatgctcaattac
aaatccagctctaattacaacaatactggcacctataacaagtcctccggccagtatgtc
attcatacccgtggctttcagtacagcgccaatgatgttgaccctgagcaagtgattaag
attaaaatccaagactctaaagtcaccagcattcaaagtaccgaacccaatgataccggt
attgtgcgtattgagccggttaccatcggtggtatttatccagataacaatgaagaccgc
atcgtgttgcctattgatgagattccgcagccgttgattgatgcgcttatcgccaccgaa
gaccgcggcttttatgagcacaaaggcgtgtcgctcaagggtatcggccgagcactgtat
aacaacttaaaaggcggctcaatgcaaggtggctcgaccatcactcagcagctgattaaa
aacttttatctaagctcagatcgcacctttaagcgtaaagccaatgaggcggtgatggcc
ttgctactcgagatgcactacagcaaagaccaaattttacaaacttatttaaatgagatt
aacctaggtcaaaatggcaaccgttctattaacggctttgggttggctgcgcagttttat
tttaataaaccgttaaaagagctgcgtattgatcagcaagccatgctggtgggcttagcc
aaaggcacaagctattacaatccacgccgcaatccagagcgtgccctcaatcgccgcaat
acagtgctggccaatatgcttgaaacgggcaaaattgatcaagccacttatgatgacgcc
attgctcaaaagcttgatgtggtacctaaaccaagcgtaggcaaaagccgattccccgac
tttttggacatcgtaaagcgtgagctgcatgataattatcatcccgatgatctaaaaaat
gaaggcctacgcgtctttagtaccttagaccctatcgctcagatgtcggctgatgcagcg
gtacaaaagcaattatcaggcttacgaaaaagcagcagcaaaaccaaggggctacaagcg
gccttggtcagtgccaatccagcttcaggtgagctgattgctgctgtgggtagtggtagc
gaatttacaggcttcaaccgagcgatagatgccaaacgtcaagtgggctcactgttaaaa
ccctttatttatatgacggcgctacaaagtggcaagtacaatctggccagccctgtgagc
gacaacccagttacgctaacgttaccagacaacaccacttggaccccaaaaaactacgat
ggccgagaccatggttacgtgcccttaaccacagcgctggccaaatcttataaccaagct
gcggtaaatacgggtatagaatttggtgtgggcccgttcgtcgatcagcttcaccgctta
ggtattaaggagaagataccaacctatccttcgttgttcttaggctcagttgagcttagt
cctatggatatgcttggtatgtatcaagtcatggccgcaggtggatttcgcacgcccatt
attagtatccgctctgtggttgatgaccgaggtcaaattctgcagcgctcagggctagat
accaagcgcagcgtgccacctgatgtcaactatctaaccaactatgcgctacaagaagtg
gtgcgcagtggaacggcaagctcgctaaaatccttaggcagtgatctaaatctggccggt
aaaacaggcaccaccaacgactaccgcgactcttggtttgccggctacagtggcaactat
gtcagcgtagtatgggtgggccgtgatgacaataagcccattggtttaagtggtggcagc
ggtgcattacctgtgtggaaggactttatgggtcgtctgcgcttgacccctgtcgagctg
gtgcagcctgacagtgtagagtggttatggctagaaaatggcaccggaaaactgtcgcat
gaaagctgtgacaatgcccgctacttgcccgtacttagcagatatttgcctgaagaggcc
agtgactgcgcccttgccatctatgagcaagagcaggcacgccaaagacagcagtggttc
aatgatcagcgcaaagctttactggatcaaagccgtcagctcgatagtgttcaagaaggt
atgcccgccaatactgattcaagcgctaatgatgatgcctctgcaggcaatgctcctgag
caagaaggctcagagcctaccaataatggtgatacttggtatgataaagcgttacaatgg
ttttaa
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