Psychrobacter sp. PRwf-1: PsycPRwf_1808
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Entry
PsycPRwf_1808 CDS
T00541
Name
(GenBank) RNAse Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
prw
Psychrobacter sp. PRwf-1
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prw03016
]
PsycPRwf_1808
Enzymes [BR:
prw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PsycPRwf_1808
Transfer RNA biogenesis [BR:
prw03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PsycPRwf_1808
Prokaryotic type
PsycPRwf_1808
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Anti-Pycsar_Apyc1
SabA_adhesion
Motif
Other DBs
NCBI-ProteinID:
ABQ94748
UniProt:
A5WGF7
LinkDB
All DBs
Position
complement(2244240..2245304)
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AA seq
354 aa
AA seq
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MLQFTFLGTSAGIPTKKRNVTALAIECLNPYAANSAQQSGSKKPWVLIDCGEATQHQLLH
TKLSVRHLAAICITHVHGDHCYGLPGLLASMAMSGRTAPLTLIAPKAILTLIQAVQSTTD
LYLPYDIDFVAIEDKVCADQSIANPVILQLSAAHKLEIKIVKLSHRVASYGFVITQVVQS
LKLNTHKLKKQGIAATAAWGQLQAGQDVMLEDGRKLVSVEYTYRESQQLKVVVGGDNDTP
ELLQQAVQGANVLIHEATYTQSVRDKIMSRPDGFDPMHTTAKCIAQFAQAMQLPALILTH
FSARYHSYDDPESKAPNMADIRLEVGQYYQGKLWLARDFMRFLVDSDGVRQLPT
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgctacagtttaccttcttgggcacctcggcaggcatccccacaaaaaagcgtaatgtc
acagccttagccattgaatgcctcaacccttacgccgcaaacagtgcgcaacaaagcggc
agtaaaaagccttgggtcttgatagattgtggcgaggctacccagcatcaattattacac
actaagctgagtgttaggcacttagcggctatctgtatcacccatgtgcatggtgatcac
tgttatggcttgcctgggctgcttgcaagtatggcgatgtcgggacgcacagcgccgctg
acccttattgctcctaaggctattttaaccttgatacaggcagtgcaatccactacagat
ttgtatttgccctatgatattgattttgtggccatagaagataaggtgtgcgcagatcag
agcatagctaaccccgttatcttacagttatctgcagcgcataagcttgagattaaaatc
gttaagctatcacatcgggttgcctcatatggctttgtgataactcaagtggtgcagagc
cttaaactcaatactcataaattaaaaaagcagggcattgcggctactgctgcctggggt
cagctgcaggcagggcaggatgtgatgttggaagatggtcgcaagctggtctctgtagag
tatacttaccgtgagagtcagcagttaaaagtggttgttggtggggataatgacacccca
gaattattgcaacaagcagtacaaggtgccaatgtgctcatccatgaggcaacctatact
cagagtgtcagagacaaaatcatgtcacgacctgatggctttgatccgatgcacaccaca
gctaagtgtattgctcaatttgcgcaggcgatgcagttgccggcattgattttgacacat
tttagtgcccgttatcacagttatgatgaccctgagagtaaagcacctaatatggcggat
atccgcttagaggtggggcagtattatcaaggcaagctgtggctggcgcgtgattttatg
cgttttttggtggacagtgatggggttcgtcagctgcccacgtaa
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