Psychrobacter sp. PRwf-1: PsycPRwf_2017
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Entry
PsycPRwf_2017 CDS
T00541
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PsycPRwf_2017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prw03400
]
PsycPRwf_2017
DNA repair and recombination proteins [BR:
prw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PsycPRwf_2017
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_I
MutS_III
MutS_IV
MutS_C
MutS_II
Motif
Other DBs
NCBI-ProteinID:
ABQ94957
UniProt:
A5WH16
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Position
2511886..2514930
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AA seq
1014 aa
AA seq
DB search
MSDTVHTTSLLNIAGVEYNLDDHTPMMVQYLTLKAQYPNALLLYRMGDFYELFFTDAQRA
ADILDITLTRRGNDKAGNNIAMAGVPFHAAESYMARLIAAGETVVICEQVEDAPELNEEH
DTNKPNAAKGIMRREVVKTLTAGTLTDDALIAPNHTPSVVALDFNLKKNWQHLKSSSNQA
SLNQIGISQLDINAGTIRTQTLPLSEVIKPAEANIAYVSESQVDYEVLLKQRLLTVLNRF
APSEVIIPETLSDDWRHWLQDKLYCPVISVAASDFHPQHAGETVCRQFNVQTLEGLGIAE
SLVAQTTSAALIHYAQQTQQRHTPQLTELIVERDEDYLIIDDISSRNLELFTPVSPTGTS
LLSVVNQCQSAMGRRLLINQLKRPLRLATHVESLGLRLDACQWLIQTPTSAEITQLQQSL
HSIADIERISSRIALHSAKPRDLRRLADSIRHSEQLAHTLQSLGLQADSEGLLPSLLQNL
PLQKNTLLKIAEHIESAIIEEPPAHIRDGGMIAEGYDSEFDRLVHLHDNIQQTLDDMADE
ARQNYQLPSLKVGFNKVSGFYFELPKAQASTAPDVFIRRQTLKNSERFITEPLKNLEVEY
LDAQSLALSCEKALYQGLLVRLSEQLQYLQQLSAAIAQIDVLLNWAVLAKDNDWVRPTLD
PSGSYLDIRQGRHLVVEAMSQPKATHGNSQPTSGPQHFVANDCQLGTESFNERLLLITGP
NMGGKSTYMRQTALIVLLACCGSFVPAASATLGDIDRIFTRIGSADDLAGGKSTFMVEMI
ETAQILNLASHCSLVLMDEVGRGTSTTDGLAIAHACAVQLCEMGSLTLFATHYFELTELS
QQRNLSGKLRNVHVAASHIDGQLLLLHKIEPGAASSSFGLHVAKMAGIPDKVLIAAERYL
SLQKSLNAATQERHHPSITPRDNHANFDKAYANDDDSRYAADLNSSALDSVTQDSLSTAP
DLSPHLSSESKVLSPLNTKAKAILDTLNDIYPDELTPRQALDLIYELKKQARLG
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaccgtgcacaccacctcactgctcaatatagctggcgttgaatacaatctt
gatgaccataccccaatgatggtgcaatatttaaccctcaaagcgcagtatccgaatgcg
ctcttgctgtaccgtatgggcgatttttatgagcttttttttaccgatgctcagcgagcg
gctgatattttagacattactttaacccgccgcggcaacgataaagcaggtaacaatatc
gctatggccggcgtgccctttcatgctgccgaaagctatatggcgcgtcttattgcagcg
ggcgaaaccgtggttatctgtgagcaagtcgaggatgcccctgagctgaatgaagagcat
gacacgaataagcccaatgcggccaaaggtatcatgcgccgtgaagtggtcaaaacatta
accgctggcactctcaccgatgatgcacttattgcgcccaatcacaccccaagcgttgtg
gcacttgatttcaatttaaagaaaaattggcaacacctaaagagtagctcaaatcaagcg
agcctaaaccagataggtatcagccagctagacatcaacgccggtaccattcgtacgcaa
accctgccactttctgaggttattaagccggctgaggccaatattgcttatgtgtctgag
tcacaggtggattatgaggtactgttaaagcagcgtctgctcaccgtactcaacagattt
gccccaagtgaagtgattattccagagacgttaagcgatgactggcgccactggctacaa
gacaagctatattgcccagttattagtgtggcggccagcgactttcacccccagcatgcc
ggcgaaacagtatgtcgacagtttaatgtacaaaccttagagggactgggcatcgccgaa
agtttggtggcacaaaccaccagtgccgccttaatccattatgctcagcaaacccagcag
cgccatacgccgcagctcactgaactgattgttgagcgtgatgaagactatttaatcatt
gatgacattagcagccgcaaccttgagttatttacccccgttagtcccacgggcaccagt
ctattaagcgtggtcaatcagtgccaaagcgccatgggcagacgcttattaatcaaccag
ctcaagcgcccgttacgtctggccactcatgttgagtcgttaggcttgcgtcttgatgcc
tgccagtggctgatacagacacccaccagcgctgagataactcagctgcagcaaagctta
cacagtatcgctgatattgagcgtatcagtagccgcattgcattacacagcgccaaaccc
cgagacctgcgacgcttagcagacagtatcagacacagtgagcagctggcccacacgtta
cagagcttagggctacaggcggacagtgagggtctactgccaagcctgctacaaaactta
ccactgcaaaaaaataccttattaaaaatcgctgaacacatcgagtcggctattatagag
gagccgccggcacatatacgtgacggtggcatgattgcagaggggtatgacagtgagttt
gatcgcctggttcatctgcatgacaatatccagcaaacccttgatgacatggctgatgaa
gcccgtcaaaattatcagctccccagcctaaaagtaggctttaacaaagtcagcggtttt
tactttgaattacccaaagcgcaagcgtctacagcgccggatgtttttattcgccgccaa
acccttaaaaacagcgagcgttttattactgagccgttgaagaatctggaggtagaatat
ctagacgcccaaagcttagcactcagctgtgaaaaggcgttatatcaagggttactggtg
cgcttaagtgaacaacttcaatatttacaacagcttagcgcagccatcgctcagattgac
gtgctgcttaactgggctgtacttgccaaagataatgactgggtacgccccacgcttgac
ccaagtggcagttatttagacattcgccaaggccggcacttagtcgtagaagccatgagt
cagcccaaagcaacccatggcaatagccaacccacctctgggccgcagcattttgtggcc
aatgattgtcaactgggcacggaatcatttaatgagcggctactactcatcactgggcca
aatatgggtggtaaatctacctatatgcgccaaactgcccttattgtgctgcttgcctgc
tgtggcagcttcgtgccggccgcctcagctaccctcggtgacattgatcgcatttttact
cgcattggatcagccgatgacttagctggtggcaaatctacctttatggtggaaatgatt
gagaccgcacaaatcttaaatctggccagccactgctctttggtattaatggatgaggtc
ggccgcggtacgtccaccacggatggtctagcgattgctcatgcctgtgccgtccagctg
tgtgaaatgggtagtctcacattatttgccacccactactttgaattaaccgagcttagt
caacaacgcaatcttagcggtaagctaagaaacgttcatgtcgccgccagtcacatcgat
ggccagctgttattactgcacaaaattgagccaggtgctgccagctcaagctttgggctg
catgtggcaaagatggccggtattcctgacaaagttttaatcgccgccgaacgctactta
agcttacaaaaatccctaaacgcagccacccaagagcgtcatcacccctcaataacgcct
agggataatcatgctaattttgataaagcttatgctaatgacgacgatagccgctacgca
gcagatttaaatagctcagctcttgattctgtgacacaagatagcctgtcaacagcgcct
gacttgagccctcatttatcaagtgaatctaaagtgcttagccctttaaatactaaggcc
aaagcgattttagatacgctaaatgacatctatcctgatgagttgacacccagacaagcc
ttggacttaatttatgaattaaaaaaacaagcacgcttgggctaa
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