Psychrobacter sp. PRwf-1: PsycPRwf_2048
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Entry
PsycPRwf_2048 CDS
T00541
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
prw
Psychrobacter sp. PRwf-1
Pathway
prw03030
DNA replication
prw03410
Base excision repair
prw03420
Nucleotide excision repair
prw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PsycPRwf_2048
03410 Base excision repair
PsycPRwf_2048
03420 Nucleotide excision repair
PsycPRwf_2048
03440 Homologous recombination
PsycPRwf_2048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prw03032
]
PsycPRwf_2048
03400 DNA repair and recombination proteins [BR:
prw03400
]
PsycPRwf_2048
Enzymes [BR:
prw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PsycPRwf_2048
DNA replication proteins [BR:
prw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PsycPRwf_2048
DNA repair and recombination proteins [BR:
prw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PsycPRwf_2048
NER (nucleotide excision repair)
GGR (global genome repair) factors
PsycPRwf_2048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
YchF-GTPase_C
HeLo
Motif
Other DBs
NCBI-ProteinID:
ABQ94988
UniProt:
A5WH47
LinkDB
All DBs
Position
2553739..2556807
Genome browser
AA seq
1022 aa
AA seq
DB search
MTDKTNKDTNLKTADTTTDTSHAALDPNILPDFEAMPNVAQMPTDHIDKQQPPFVLVDGS
YYLFRTYHALPKTMMTTQGLTTNAIRGTLNALLKVMRRYHPTHMAVCFDTKSPTFRHTMS
EEYKANRPKMDPELAEQIPYIHRLVRALGIPLLRIEGAEADDIIGTLTHRAIEEGHHVVI
STGDKDMMQLVNDCVILEDSFAGKVVDVPAVEEKFGIKPNQIIDLLTLMGDASDGIKGIP
SVGQKTAVKWLNQYQTVDNILANAHNIKGKVGEKLVEFVDNIPRDRQLATIVTNLDIGQD
WEDLRINTDSSTFVAELRDLYSELEFKNELASLDHPNHPANSSVHSVADSKADAESQAQV
AKTLQHQKQSSIIEHIKNSNTHDKAWHTILDESAFDNLLNKLQAAPYFAVDTETTSINWR
EAQIVGLSFSVQAHEAYYLPLAHVDYNEPQKKAKNKKEEAEQAKLLANATVDPLIAKQLD
RDTVLAKLKPILENPNIGKIGQHLKYDAHVLSKYGIELNMSPKNWEMDTMLASYVLNAAA
TRHSMDDLARHYLHTQTISFEDVAGKGAKQVTFDKVAINIASDYACEDADITYQLFELFQ
DKLKDDAVNQRLLHELEIPVAQILCQMESEGIMIKRSFLNELSERFDEEIVALEKQAYIE
AGEAFNLGSPKQLGEMLFDKLGVIGGKKTKSGQYSTGEAVLSKIEHPLAEIALEYRSLAK
LKNTYTDALDAVADNDTDRVHTSYHQALTSTGRLSSTDPNLQNIPIRTKTGRLIRQAFIA
PKGRVLLAADYSQIELRLMAHFSGDDNLTRAFNEGLDIHSATAAEVLGKSVDDVTPTERR
NAKAINFGLLYGMSAFGLAKQIQMGRSEAQDYINQYFARYPGVQRYMQETRNSAVDNGYI
ETILGRKLYTPDIQHSNQMVRRGAERAAINAPLQGSAADLIKLAMIAVDNVLPKQNAKML
LQVHDELVFEVDADKVDHIAKLIKNAMQNVLSDTAKQMGWDVDFAVPLLVETGVGDNWDE
AH
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataaaaccaataaagacactaacctcaaaactgccgataccacaaccgacacc
tcccatgcggcattagatcccaatatattgccggatttcgaggccatgcctaatgtggca
cagatgcctacagatcatatcgataaacagcagccaccttttgtgctggtagatggctct
tactatctgtttcgcacttaccatgcgctgcctaagaccatgatgaccactcaaggcctg
actactaatgccattcgcggcacgctcaatgcgctactcaaagtaatgcgccgctatcat
cccacccatatggccgtatgctttgacactaagtcacccacgtttcgtcacaccatgtca
gaggaatacaaagccaatcgcccaaaaatggatcctgaattggccgaacaaatcccttat
attcaccgtttggtacgggcacttggcattccactgctgcgtattgaaggcgctgaggct
gatgacattatcggtaccctgacccaccgcgctattgaagagggtcatcatgtggtcatc
tcaaccggtgataaagacatgatgcagctggtcaacgactgtgtcatattggaggacagc
ttcgccggcaaagtggtcgatgtgccagcggttgaagaaaaatttggtattaaacccaat
caaatcattgacctacttactcttatgggggatgcttctgacggcattaagggtatacct
agtgtcggtcaaaaaaccgcagttaaatggcttaatcagtaccaaaccgtagataatatc
cttgctaatgctcacaacatcaaaggcaaagtgggcgaaaagttggtggagtttgtagat
aatattccccgtgatcggcagcttgccaccattgtgaccaacctagatatcggtcaggac
tgggaagacctgcgcattaataccgatagcagcacttttgtggctgaattgcgagactta
tatagtgagcttgaattcaaaaatgaattggcatcattggatcatcccaatcaccctgcc
aactcaagcgtccatagtgtggctgatagcaaagccgatgctgagtcacaagcacaagtg
gcaaaaaccctacaacaccaaaaacagagctctattattgagcatatcaaaaatagcaac
acgcatgacaaagcttggcacaccatccttgatgagtctgcctttgataatttactaaac
aaactacaggcagcgccttactttgctgtcgataccgagaccaccagtatcaactggcgt
gaagcacagatcgtgggcctgtccttttctgtgcaagcgcatgaggcttattatttacca
ctggcacatgtggactataacgaaccgcaaaaaaaggcgaagaacaaaaaagaagaagct
gaacaagcaaaactacttgcaaatgcaacagttgatccgctaatagccaaacagcttgac
cgtgatacagtgcttgccaaattaaagcctattttagagaaccctaacattggcaaaatc
ggtcaacatctaaaatatgatgctcatgtattgagcaagtatggtatcgagttaaatatg
tcacccaaaaactgggaaatggataccatgctagcaagctacgtgttaaatgcagcagct
acccgtcacagcatggacgatcttgcccgccattatttgcatacccaaaccattagcttt
gaagacgtcgcgggtaaaggggctaagcaggtgacctttgataaagtcgctattaacatt
gccagtgactatgcgtgtgaagacgccgatattacctatcaattgtttgagctgttccaa
gataagctcaaagatgacgcggtcaaccaacgcctattgcatgagcttgagattcctgtg
gcacagatattgtgtcagatggagtccgaaggcattatgatcaaacgctcattcttaaac
gagttgtctgagcgctttgatgaagagattgttgcgcttgaaaagcaagcctacattgaa
gccggagaagcgtttaacctaggctcacctaagcaattgggtgaaatgctgtttgataag
cttggcgttattggcggtaaaaaaaccaaatcgggtcaatactcaaccggtgaggcagta
ttgtcaaagattgagcacccactggctgagattgcgctagaatatcgtagcttagctaag
ctcaaaaacacctataccgatgcactcgatgcggtagccgataacgatactgaccgtgtg
cataccagctatcatcaagccttaaccagtaccggtcgcctctcctctactgatccaaac
ttgcagaacattcctattcgcaccaagactggccgcttaattcgccaagcctttatcgca
cctaaaggccgagtgctactggcggcggactactcacagattgagctgcgcttaatggca
catttctcaggtgacgacaacctgactcgcgcctttaatgaaggcttggacattcatagt
gccacagcagctgaggtgcttggtaaatcagtcgatgatgttaccccaaccgagcgccgt
aacgccaaagccattaactttggtttgctctatggtatgagcgcctttggtctggccaag
caaattcaaatgggacgcagtgaagcacaagactatatcaatcagtacttcgcacgttat
cctggcgtgcagcgttatatgcaagagactcgaaatagcgcggtagacaatggctatatc
gaaaccatcttagggcgtaagctttataccccagacattcagcacagcaatcaaatggta
cgccgcggcgccgaacgtgctgccattaatgccccactacaaggcagtgccgctgattta
attaagcttgcgatgattgcggtggataacgtattgcccaaacaaaatgccaaaatgcta
ttacaggtgcatgatgaattggtatttgaggtggatgccgataaggtcgatcacattgct
aagcttattaaaaatgcgatgcaaaatgtactgagcgataccgctaagcagatgggctgg
gatgttgattttgccgtaccattattggtggaaaccggtgtcggtgataactgggatgag
gcgcattaa
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