Pseudomonas rhodesiae: HRH33_00260
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Entry
HRH33_00260 CDS
T07097
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02025
Biofilm formation - Pseudomonas aeruginosa
prx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HRH33_00260 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HRH33_00260 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prx02044
]
HRH33_00260 (tssM)
Secretion system [BR:
prx02044
]
Type VI secretion system
Imp/Vas secretion system core components
HRH33_00260 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related_N
IcmF-related
IcmF_C
IcmF_helical
T7_gp14
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
QKJ71060
LinkDB
All DBs
Position
complement(51576..55076)
Genome browser
AA seq
1166 aa
AA seq
DB search
MKAFFSFMIRWVIPVLGLIALSLIIWFVGPLLDVLVPQGRRWALIVLMFAVWIAYRVFRI
IQARRQAAEVMRSLAADAPVDPNSVATAEELATLRQRMDEALALLKKAKLGGDERRNLYE
LPWYVIIGPPGSGKTTALVNSGLHFPLAAQLGAGAVRGVGGTRNCDWWFTDQAVLLDTAG
RYTTQDSNSAVDKAAWLGFLDLLKKQRSRRPIDGAFIAISLSDLLLGTDAERAAHAAAIR
LRIQELYTQLGVRFPIYLMLTKLDLVPGFMEFFDNLSKEERAQVWGMTFALDDGKSTDSP
LAHLQSEFAGLEQRLNERLVERLQQERDPARRDLIYGFPQQFGALKDCLQSFLEGVFKPN
AFEERVLLRGVYFTSGTQEGSPIDRLIGAMAQSMNLDRQHLARQSGTGRSYFIEKLFTAV
AFAERGLVGVNPKVERRRKWIARGVLAATVALVVVVSGLWWVSYRANQAYIAQVDQKVAP
LGQTVQNLSPAQRDVLAVLPLLNAVKNLAGDSPSWSEGLGLYQGDMLEAESASVYRKLLI
AVFAPRLVTRIEEQLHGGGNSDFLYEGLKAYLMLADSEHYDPDFIKAWIALDWDRNLPRD
LPADQRQALTGHLQALFERHPPNARLDPRLIDDLRRQLQQLPVAQRVYDRVKRQKLPDGI
PDFRINEAAGRDAALVFSRKSGKPLGEPLSGFFTAKGYRQAFLLSSLNQTGTLAEEQWVL
GHEQADQQNVVSLAADVRRLYFQDYQRQWDALLADIDFVPITSVAQAADVLRVISGPTSP
LKKLLVAVAKETDLQAEERQLAAKGVPVEGGVDKLKERLGSLLGQEQATANAPAATDDPV
TAHFAELNSIVSKNEGEPAAIDGLLADMNALYVQVSAMVGASGDALLGEAKNQAAAAATR
VSLNAERQPPLVQGMVKSVVNSTTNSMMGGVRNQLNAAWVSEVVNVYRQSLAGRYPMSPG
SARDATLDDFGQFFGVGGVMDNYFRKYLQPYVDTSAQTWRWQPGAAQKLGIAPGVLQTFQ
RAATIRDAFFRSGGTQPIVRFELKPVSMDPSITQFLLDLDGQQLSYDHGPSRPVAMQWPN
PGSIGVVRISIMPPSASGRSGVTLDGPWAWFRLLEQSDLTPGNSPDRFNLRLRVDGASIA
YELRANSAFNPFKSRVLSGFSLPERL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggcgtttttcagttttatgattcgctgggtgatcccggtactgggcctgatcgcc
ctgagcctgatcatctggtttgtcgggccgttgctcgacgtgctggtgccgcaagggcgc
cgctgggcattgatcgtcctgatgttcgcggtgtggatcgcctatcgcgtgttccgcatt
atccaggcgcgccgccaggccgccgaagtgatgcgcagcctggcggcggacgccccggtg
gaccccaacagcgtggccaccgccgaagaactcgccaccctgcgccagcgcatggacgag
gccctggcgctgctcaagaaagccaaacttggcggcgacgagcggcgcaacctctacgaa
ctgccgtggtacgtgatcatcggcccgccgggttcgggcaagaccaccgcgctggtcaac
tccggcctgcacttcccgctggccgcgcagctgggcgccggggcggtgcgtggcgtcggc
ggtacgcgtaactgcgactggtggttcaccgaccaggccgtattgctcgacaccgccggc
cgctacaccacccaggacagcaactcggcggtggataaagccgcgtggctgggctttctc
gacctgctgaaaaaacaacgctcgcgccgccccatcgacggcgcattcattgcgatcagc
ctttcggatttgctgctcggcaccgacgccgagcgcgccgcccacgcggcggcgattcgc
ctgcggatccaggagctgtacacgcaattgggcgtgcggttcccgatctacctgatgttg
accaaactcgatttggtccccggcttcatggagtttttcgacaacctgagcaaggaagag
cgcgcccaggtgtggggcatgacctttgccctggacgacggcaaaagcaccgacagcccg
ctggcgcatctgcaaagcgagttcgccggcctggaacagcgcctcaacgaacgcttggtg
gaacgcctgcaacaggagcgcgacccggcgcggcgcgacctgatctacggcttcccgcag
caattcggggccttgaaggattgcctgcagagcttcctcgaaggtgtgttcaaacccaac
gcgtttgaagagcgtgtgttgctgcgcggcgtgtatttcaccagcggcacccaggaaggc
agccctatcgaccgcctgatcggcgccatggcccagagcatgaacctggaccgccagcac
ctggcgcgccagagtggcaccgggcgcagctacttcatcgaaaaactgttcaccgccgtc
gcctttgccgaacgtggcctggtgggcgtcaatcccaaggtcgagcggcgtcgcaagtgg
atcgcgcgcggtgtcctcgcggccaccgtagccctggtggtggtggtcagcggcctgtgg
tgggtcagttatcgcgccaaccaggcttatatcgctcaggtcgaccagaaggtcgcgccc
ctgggccagaccgtgcaaaacctcagcccggcacagcgcgacgtactcgcggtgctgccg
ctgctcaatgcggtgaagaacctggcaggggattcgccgagttggtccgagggcctgggg
ctgtatcagggcgacatgctcgaagccgagtccgccagcgtctaccgcaaattgttgatt
gccgtattcgccccgcgactggtgacgcgcatcgaggaacaactgcacggcggcggcaat
tccgacttcctctacgaaggcctcaaggcctacctgatgctcgccgacagcgagcactac
gacccggacttcatcaaggcgtggatcgccctggactgggaccgcaacctgccacgggac
ctgccggccgatcagcgccaggcgctgaccgggcacttgcaggccctgttcgaacgccat
ccgccgaacgcacgcctggacccgcggctgattgacgacctgcgtcgtcaattgcaacaa
ctgccggtggcgcagcgtgtgtatgaccgggtcaagcgccagaaactgcccgacggtatc
ccggactttcgcatcaacgaagccgccgggcgtgatgccgcgctggtgttcagccgcaag
agcggcaagcctctgggcgagccgttgagtgggttctttaccgccaagggttatcgtcag
gccttcctgctgagcagcttgaaccagaccggcaccctcgccgaagaacagtgggtgctg
ggccacgaacaggccgatcaacagaacgtggtgagcctggccgccgatgtgcggcgcctg
tatttccaggactaccagcgccaatgggacgccttgctggcggacatcgactttgtgccg
atcaccagcgtggcccaggccgccgacgtgctgcgggtgatctccggcccgacgtcgcca
ctgaaaaaactgctggtggcggtggccaaggaaaccgatctgcaagccgaagaacgccaa
ctggccgccaaaggggtgccggtcgaaggcggcgtcgacaagctcaaggaacgcctcggc
agcctgttgggccaggagcaagctacggccaacgcgccggcggcgacggacgatccagtc
actgcgcactttgccgaactcaacagcatcgtcagcaagaatgaaggcgaaccggcggcc
atcgacggcctgctggcggacatgaatgcgctgtatgtgcaggtcagcgccatggtcggc
gccagcggcgatgcgttgctcggcgaggcgaagaaccaggcggcggctgcggccacacgg
gtcagcctgaatgccgagcgccagccgccgctggtgcagggcatggtcaagtcggtggtc
aattccaccaccaacagcatgatgggcggggtgcgtaaccaactgaacgcggcgtgggtc
agcgaagtggtcaacgtgtaccgccagtcgctggccgggcgttacccgatgtcgccgggc
agcgcacgggacgccaccctggatgacttcggccagttcttcggcgtgggcggggtgatg
gacaactacttccgcaaatacctgcaaccctatgtggacacctccgcgcagacctggcgc
tggcagccgggcgcggcgcagaaactggggatcgcgccgggcgtgctgcaaaccttccag
cgtgccgcgacgattcgcgatgcgttcttccgctctggcggcacccaaccgattgtgcgg
ttcgagcttaaaccggtgtcgatggacccgagcatcacccagttcctgctcgacctcgac
ggccaacaactgagctacgaccatggcccgagccgcccggtggcgatgcaatggccgaac
ccgggcagcattggcgtggtgcgtatttccatcatgccgccatcggccagtggccgttcg
ggcgtgaccctcgacggcccgtgggcgtggttccgcctgctggaacagtcggacctgacc
cccggcaactcgccggaccgtttcaacctgcgcctgcgggtcgacggcgcgagcatcgcg
tacgagctgcgcgccaacagtgctttcaacccgtttaagagccgggtgctcagcggtttc
agcctgccggagcggctatga
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