Pseudomonas rhodesiae: HRH33_00320
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Entry
HRH33_00320 CDS
T07097
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02025
Biofilm formation - Pseudomonas aeruginosa
prx03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HRH33_00320 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HRH33_00320 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prx02044
]
HRH33_00320 (tssH)
Secretion system [BR:
prx02044
]
Type VI secretion system
Imp/Vas secretion system core components
HRH33_00320 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Zeta_toxin
Sigma54_activat
AAA_25
TniB
nSTAND3
AAA_7
ATPase_2
NACHT
AAA_14
Clp_N
AAA_18
Torsin
Hpr_kinase_C
CbiA
SRP54
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
QKJ71072
LinkDB
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Position
67178..69835
Genome browser
AA seq
885 aa
AA seq
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MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSGEFDKIKAEALSERFDEYVGDSPENALTASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPSLKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEQHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIDTGARQSNSEAL
LAAERERLATLESRWAEEKALVDELLATRATLREKAGVVDSGNDELRTQLVDLQQRLTAL
QGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMI
AKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEA
HTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVME
DGEGRVIDFKNTLILLTTNAGTELISQVCKDPANIPEPEEIAKALRQPLLEIFPPALLGR
LVTIPYYPLSDEMLKAITRLQLNRIKKRVENTHKVAFDYDDAVVDLIVSRCTETESGGRM
IDTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNELHYDFND
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcactgttcggcaaactcaacagcgtggcctacaaagcc
atcgaagccgccaccgtgttctgcaagttgcggggcaatccttacgtggaactggcccac
tggttccaccagttgctgcaactgcaggactcggacctgcaccgcatcatccgccagttc
aacgtcgagccggcgcgcctggcccgcgacctgaccgaagccttggaccgtctgccgcgc
ggctcgacttccatcaccgacctgtcgtcccacgtagaagaagcagtggaacgtggctgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggttatctggtgctgggc
attctcaagaccccgagcctgcgccatgcgttgttgggcttgtccggcgagttcgacaag
atcaaggccgaggccctgagcgagcgttttgacgaatacgtcggcgactcgccggaaaac
gccttgaccgccagcgacggtttcaacgccggcgccgttccgggcgaagccagcggcgcc
atggcgcccagcgcaatgggcaagcaggaagccctcaagcgcttcactgtggacctgacc
gaacaggcgcgcagcggcaagctcgacccgatcgtggggcgtgacgaagagatccgccag
ttggtcgatatcctcatgcgtcggcgccagaacaacccaatcctcaccggtgaagccggg
gtgggtaaaaccgccgtggtcgaggggtttgccctgcgcatcgtcgccggcgatgtgccg
ccgtcgctcaaggatgtggaactgcgcagcctggacgtgggcttgctgcaagccggcgcc
agcatgaaaggcgagttcgaacagcgcctgcgccaggtgattgaagacgtgcaggcttcg
cccaagccgatcatcctgtttatcgacgaagcccatacgctggtgggcgctggtggcgcc
gccggcaccggcgatgcggccaacctgctcaagcctgcgctggcccgcggcaccctgcgc
accgtggccgccaccacctgggccgagtacaagaagcacatcgagaaagacccggccctg
acccgccgcttccaagtggtgcaagtggccgagccctccgaagataaagccctgttgatg
atgcgcggcgtggcctcgaccatggaacagcaccaccaggtgcagatccttgacgaagcc
ctggaagcctcagtgaagctgtcgcaccgctacattccggcgcgccagttgccggacaaa
tccgtgagcttgctggatactgcctgcgcccgtgtcgccatcagcctgcacgcggtgccg
gccgaagtggacgacagccgccgtcgcatcgaggccctggaaaccgagctgcagatcatt
gcccgcgagcatgccattggcatcgacaccggagcgcgccagagcaacagcgaagccctg
ttggccgccgaacgcgagcgcctggccaccctcgaaagccgttgggccgaagagaaagcc
ctggtggacgagctgctcgcaacccgtgccaccctgcgcgaaaaggccggggtggtggac
agtggcaacgacgaattgcgcactcaattggtcgacctgcaacaacgcctcaccgctctg
caaggcgaaaccccgctgatcctgccgaccgtggattaccaggccgtggcctcggtggtc
gccgactggaccggcatcccggtgggccgcatggcccgcaacgaattggaaaccgtgctg
aacctggatcagcacctgaaaaaacgcatcatcggccaggaccatgccttgcagatgatc
gccaagcgcatccagacctctcgcgccggcctcgacaacccgagcaagccgatcggtgta
ttcatgctggccggcacctccggcgtgggcaagaccgaaaccgccctggccctggccgaa
gccatgtatggcggtgagcagaacgtcatcaccatcaacatgagcgagttccaggaagcc
cacaccgtgtcgaccctcaagggcgcgccaccaggctacatcggctacggcgagggcggt
gtgctgaccgaagcggtacggcgcaagccctacagcgtggtgctgctggacgaggtagaa
aaagcccacccggacgtgcacgagattttcttccaagtgttcgacaaaggcgtaatggaa
gacggcgaaggccgggtgatcgacttcaagaacaccttgatcctgctgaccaccaacgcc
ggcaccgagctgatttcccaggtctgcaaagacccggcgaacatccccgagcccgaggag
attgccaaggccctgcgccagccgctgctggagatcttcccaccggccctgctcggccgc
ctggtgacgatcccttactacccgctgagcgacgagatgctcaaggcgatcacccgcttg
cagctcaaccgcatcaaaaaacgtgtggagaacacccacaaggtcgccttcgactacgac
gacgcggtggtcgacctgatcgtctcgcgttgcaccgaaaccgaaagcggcggacgcatg
atcgacaccatccttaccaacagcctgctgccggacatgagccgtgaattcctcacgcgc
atgcttgagggcaaggcgctggcgggtgtgcggatcagcagtcgggataatgagctgcac
tacgacttcaacgattga
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