Pseudomonas rhodesiae: HRH33_01290
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Entry
HRH33_01290 CDS
T07097
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03030
DNA replication
prx03410
Base excision repair
prx03420
Nucleotide excision repair
prx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HRH33_01290 (polA)
03410 Base excision repair
HRH33_01290 (polA)
03420 Nucleotide excision repair
HRH33_01290 (polA)
03440 Homologous recombination
HRH33_01290 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prx03032
]
HRH33_01290 (polA)
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_01290 (polA)
Enzymes [BR:
prx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HRH33_01290 (polA)
DNA replication proteins [BR:
prx03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HRH33_01290 (polA)
DNA repair and recombination proteins [BR:
prx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HRH33_01290 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HRH33_01290 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QKJ71261
LinkDB
All DBs
Position
283373..286165
Genome browser
AA seq
930 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVEGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLKELYEQLDIVPTLPIRGAKNLPAKLEEHREM
AFLSYQLATIKIDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWYDEVQRDTKRVELKA
STEAAPVAAVAEAVVVAPVEAVYTTILDQATFDVWLKKLDAATLIAFDTETTGIDAHQAQ
LVGVSFAVQPHEAAYVPLAHSYIGVPQQLDRDSVLLALKPLLEDPNKLKVGQHAKFDMNI
LANCAIGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVSFQDIAGK
GAKQLTFDQIPLEQAGPYAAEDADVTLRLHQALHARLAAIPSLASVLTDIEMPLVPVLAR
IERQGALVDAQLLGVQSIELGNKMVELERQAFEIAGEAFNLGSPKQLGAILYEKLGLPVL
KKTGKGQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTS
YHQAVAATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLS
KDEGLMNAFRHNLDVHTATAAEVFKVELGAVTSDQRRSAKAINFGLIYGMGAQKLGKDIG
VDTKTAKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERAA
AERTAINAPMQGTAADIIKKAMVRVDNWLTDSGLDAKVILQVHDELVLEVREDLVAQISE
KIREHMSAAAQLDVPLLVEVGVGDNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcgtcctacctgtaccgcgccttccac
gcgctgccaccgctgaccacctccaaaggcctgccgaccggtgcggtcaaaggcgtcttg
aacatgctcaaaagcctgcgcaagcagtacccggacagcccgttcgcggtggtgttcgac
gctaagggtgggacttttcgcgatgacatgtacgccgaatacaaggccaaccgccccagc
atgcctgatgacatgcgcctgcagatcgagccgctgcaccagagcgtgatcgctctgggc
ttcccgttgctgtgcgtcgaaggcgtcgaggccgacgacgtgatcggcaccctggcgcgc
agcagtgcggccgctgaccgtccggtagtgatctccaccggtgataaagacatggcgcag
ttggtcgacgggcacattaccttggtcaacaccatgaccggtagcgccttggacgtggag
ggcgtaaaggagaaatttggcgtcgctcccgagcagatcatcgactatctggcgttgatg
ggcgattcgtccgacaacatccccggcgtaccgggcatcggccccaagactgcgtccggc
ctgctggtgggcgtcaatggtggcctcaaagagctttatgagcagttggatatcgtgccg
acgctgccgatccgtggggccaagaacctgccggccaagttggaagaacacagggaaatg
gcgtttctttcctaccaattggcgacgatcaagatcgatgtgccactggacgtgggcctg
gatgacctgcatctgatcgaaccggaccgtgaaaaactgctggagctgtacaccctgctg
gagttcaagagctggtacgacgaagtgcagcgtgataccaaacgcgtcgaactgaaggcg
tcgaccgaagcggcccccgtcgcggcggtagcggaggcagtggttgtggcccctgttgaa
gcggtctacaccaccatcttggatcaggccacgttcgacgtctggctgaagaagctcgac
gctgcaacgttgatcgcgttcgacacggaaaccaccgggatcgacgcgcatcaggcgcaa
ttggtcggcgtgtcctttgctgtgcagccccacgaagcggcctacgtccccttagcccat
tcctacatcggcgtaccgcagcaactggatcgcgacagcgtattgctcgccctgaaaccg
ctgctggaagatccgaacaagctcaaagtcggccagcacgccaagttcgacatgaacatc
ctggccaactgcgccatcggcggcgaccccgcgcacggcatcacggtgcgcggcattgca
ttcgacaccatgctcgaatcctacgtgctcaattccaccgcgacccggcatgacatggac
agcctggcgaagaaatacctggactacgacacagtcagcttccaagacatcgccggcaaa
ggcgccaagcaactcaccttcgaccagattccactggagcaggccgggccttatgcggct
gaagatgccgatgtgacgctgcgtctgcatcaggcgttgcatgcgcgactggccgccatc
ccgagcttggccagtgtgctgacggacattgaaatgccgttggtgccggtgttggcacgc
atcgagcgtcagggtgccttggtggatgcgcagctgctgggcgtccagagcatcgaactg
ggcaacaagatggtggagctggagcgccaagcattcgagatcgccggtgaggcgttcaac
ctgggctcgcccaaacaactgggggcgattctttacgaaaagctcgggcttccggtactg
aagaaaaccggcaaaggccaggcctccaccgctgaagaagtgctggccaagctggcggaa
gatgactacccgttgcccaaagtgctgatgcagtaccgcagcatgagcaagctcaaaagc
acatacaccgaccgcctgccggagcagatcaacccgcgcaccgggcgtatccacacgtct
tatcaccaggcagtggcggcgaccggtcgactgtcgtccagtgacccgaacctgcagaac
attccggtgcgtaccgccgaggggcggcggattcgccaggcgtttgttgcgcccaagggc
tacaagctgctggcggcggactattcgcagatcgagctgcgcatcatggcgcacttgtcc
aaagacgaagggctgatgaatgccttccgtcataacctggatgtgcacacggccacggcg
gccgaagtgttcaaggtcgagctgggggcggtcacgtccgaccagcgtcgcagcgccaag
gcgatcaactttggtctgatctatggcatgggcgcgcaaaagttgggtaaggacattggg
gtcgataccaagacggccaaggcttatatcgacgtctacttcgcccgctacccgggagtg
cgcgagtatatggagcgcactcgggctcaagcggccgatcaaggttatgtcgaaaccttc
ttcgggcgccggctgtacctgccggatatcaactccaataaaccccaagagcgcgccgcg
gcggaacgcaccgcgatcaacgcgccgatgcaaggcacggcggcggacatcatcaagaaa
gccatggtgcgggtagataactggctcaccgactcgggcctggacgccaaggtgatcctg
caagtgcacgacgaactcgtgctggaagtgcgtgaagacctggttgcgcaaatcagcgag
aagatccgcgagcatatgagcgccgcagcccagctggatgtgccgttgctggtggaagtg
ggcgtgggtgataactgggacgaggcacactga
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