Pseudomonas rhodesiae: HRH33_04605
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Entry
HRH33_04605 CDS
T07097
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
prx
Pseudomonas rhodesiae
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prx03400
]
HRH33_04605 (phrB)
Enzymes [BR:
prx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HRH33_04605 (phrB)
DNA repair and recombination proteins [BR:
prx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HRH33_04605 (phrB)
Prokaryotic type
HRH33_04605 (phrB)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QKJ71876
LinkDB
All DBs
Position
complement(1051156..1052601)
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AA seq
481 aa
AA seq
DB search
MHLIWLRTDLRLHDNTALAAASQRGPLAAVYLITPEQWLAHDDAPCKVDFWLRNLRHLSR
SLGELNIPLLIRTAATWDQAPAVLRQLCGELGVASVHVNEEYGIHESRRDAAVATALEAD
GVTFHSYLDQLFFQPGSVLTKSGTYFQVFSQFRKVCYTRLHSALPRLVSTPKAQAKLAIK
SDTVPATVDGFEPPSERLRALWPAGEDEARRRLETFADAQISYYKDERDFPAKPGTSQLS
AYLAAGVVSPRQCLHAALQTNQGEFESGDIGAITWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVAWRDAPKDLAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFSPLSQSEKFDSEGVFIK
HWLPELAGLNKKEVHNPDAVGGLFGVADYPRAIVDLKKSRERALAAFRSLPSREAVGGAH
E
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgatctggctgcgcaccgacttgcgccttcacgacaataccgccctggccgct
gcgagccagcgcggcccgctggcagcggtgtacctgatcacgcccgaacaatggctggcc
cacgatgacgcgccgtgcaaagtggatttctggctgcgtaacctgcggcacttgagccgg
tccctgggcgaactcaacatcccgttgctgatccgcaccgccgccacctgggaccaggca
cccgccgtgctccgccaattgtgcggcgagttgggcgtggcgtcggtgcacgtcaacgag
gaatacggcattcatgaaagccgccgagatgcggcggtggccacggcgctggaagccgat
ggggtgaccttccacagctacctggatcaattgtttttccaacccggcagtgtgctgacc
aaaagtggcacgtatttccaggtgttcagtcagttccgcaaagtctgctacacccgtctg
cacagcgccctaccgcgcctggtgagcacgcccaaggcacaggcaaaactggcgatcaaa
agcgacaccgtgccagccaccgtcgatggcttcgaaccgccgagcgaacgcctacgcgcc
ctctggcctgccggtgaagacgaagcccgacgccgcctggaaaccttcgccgatgcgcag
atcagctactacaaggacgagcgcgacttcccggccaagcccggcaccagccagttgtcc
gcctacctggccgccggcgtggtctcgccgcgccaatgcttgcacgcggcgctgcaaacc
aatcagggcgagttcgaaagcggcgatatcggggcgatcacctggatcaacgaactgctg
tggcgtgagttctacaaacacattctggtgggctacccccgggtgtcccgtcaccgcgcc
ttccgccccgaaaccgaagccgtggcctggcgcgatgcgcccaaggacctggcggcctgg
caagaggcgcgcaccggtctgccgatcatcgacgcggcgatgcgccagttgcttgaaact
ggctggatgcacaaccgcctgcgcatggtggtggcgatgttcctgaccaagaatctgttg
atcgattggcgcgaaggcgaacggttcttcatgcgccatctgatcgacggcgacctggcc
gccaataatggcggctggcagtggagctcttccaccggcaccgactcggcgccgtacttc
cggattttcagcccgctgagccaatcggaaaaattcgacagcgaaggcgtgttcatcaag
cactggctgccggaactggccgggctgaataaaaaggaagtccacaaccccgacgcggtt
ggcggattgtttggcgtggcggattacccgcgcgccattgtcgatttgaaaaaatcccgc
gagcgcgccctggcggcgtttcgcagtctgccgtcgcgcgaagcggtaggaggtgcccat
gagtga
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