Pseudomonas rhodesiae: HRH33_05840
Help
Entry
HRH33_05840 CDS
T07097
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
prx
Pseudomonas rhodesiae
Pathway
prx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HRH33_05840 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prx03019
]
HRH33_05840 (rhlB)
Enzymes [BR:
prx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HRH33_05840 (rhlB)
Messenger RNA biogenesis [BR:
prx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HRH33_05840 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QKJ75978
LinkDB
All DBs
Position
complement(1311388..1312857)
Genome browser
AA seq
489 aa
AA seq
DB search
MTVLKALKKMFGKSEAEPLAPVPSAPVPTPGSRNDGQQPGRTAPVAPPRKPSVTAPEQTA
PAEATPAPQAKAPRRQRAPKPPVTPWKLEDFVVEPQEGKTRFHDFKLAPELMHAIQDLGF
PYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLQTPPPKERYMGEPRALI
IAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARHCDILVATPGRLLDF
NQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKSERQTLLFSATFTEDVMNL
AKQWTTDPSIVEIEAENVASENVEQHIYAVAGADKYKLLYNLVNDNGWERVMVFANRKDE
VRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRGIHIDGISHV
INFTLPEVPDDYVHRIGRTGRAGAAGVSISFAGEDDSYQLPSIEALLGRKISCETPPTHL
LRAVERKRP
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atcaccgtgctcaaagcactcaagaagatgttcggcaaaagcgaggctgagccgctcgcg
cctgttcccagcgcccctgtcccgacgcccggcagccgcaatgacggtcaacagcccggc
cggaccgcacctgtggccccgcccaggaagccatcggtgaccgcgcccgaacagactgca
ccggctgaggccacgccagccccgcaagccaaagcaccgcgccgtcaacgcgcgcccaaa
ccgccggtcaccccatggaaactcgaagacttcgtcgtcgagccccaggaaggcaagacc
cgcttccatgacttcaagctggctccggaactgatgcacgccatccaggacctgggcttc
ccgtactgcacgccgatccaggcgcaggtgctgggctttaccctggccggcaaagacgcc
atcggccgcgcgcagaccggcaccggcaagaccgccgcattcctgatctcgatcattacc
caactgctgcaaacaccaccgcccaaagaacgttacatgggtgaaccgcgcgcgctgatc
atcgcgccaacccgcgagttggtggtacagatcgccaaggacgccgccgacctgaccaag
tacaccggcctcaacgtcatgacattcgtaggcggcatggacttcgacaagcagctcaag
cacctcgaagcccgccactgcgacatcctggttgccactccgggtcgcctgctggacttc
aaccagcgcggcgacgtgcatttggacatggtcgaagtgatggtgctggacgaggccgac
cgaatgctcgacatgggctttatcccacaggtacgccagatcattcgccagaccccgccg
aaaagcgagcgtcagaccctgctgttctccgcgaccttcaccgaagacgtgatgaacctt
gccaagcaatggaccaccgacccatcgatcgtggagatcgaagcggaaaacgtcgccagc
gaaaacgtcgagcagcacatctatgccgtggccggtgccgacaaatacaaactgctctac
aacctggtcaacgacaacggttgggagcgggtgatggtgttcgccaaccgcaaggacgaa
gtgcgccgcatcgaagaacgcctggtgcgtgacggcgtgaacgccgcgcaactgtccggc
gacgtgcctcagcacaagcgcatcaagaccctggaaggtttccgcgaaggcaagattcgc
gtgctggtggccaccgacgtggcaggccgcgggattcacatcgacggcatcagccatgtg
atcaacttcactctgccggaagtgccggacgactatgtacaccgcatcggccgtactggc
cgcgccggagcggcgggtgtgtcgatcagctttgccggggaagatgactcgtatcagttg
ccgtcgatcgaagcgctgctggggcgcaagatcagctgcgagacaccgccgacgcatcta
ttgcgggccgtagagcgcaaacgcccgtaa
DBGET
integrated database retrieval system
