Pseudomonas rhodesiae: HRH33_06050
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Entry
HRH33_06050 CDS
T07097
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HRH33_06050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prx03021
]
HRH33_06050
Transcription machinery [BR:
prx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HRH33_06050
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_20
HTH_28
GerE
HTH_24
Xre-like-HTH
HTH_38
Trp_repressor
TnsD
HTH_40
HTH_11
HTH_10
CHASE3
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QKJ72144
LinkDB
All DBs
Position
complement(1355201..1355689)
Genome browser
AA seq
162 aa
AA seq
DB search
MSPSNTVEVLYNDHHHWLIGWLRRKLGCPESAADLAQDTFIRVLTARETPTLIEPRAFLT
TVAKRVLYNFYRRQDLERAYLETLAQMPEQVAPSEEERAVILQTLMELDQLLDGLPVQVK
RAFLLAQLDGLTYAQIGAELGISIATVKRHLHKAALRCYFAL
NT seq
489 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgccgtccaacaccgtcgaagttttgtacaacgaccatcaccactggctcatcggc
tggttgcgacgcaagctcggctgcccggaaagtgccgccgacctggcccaggacaccttt
atccgcgtgctcaccgcccgcgaaaccccgacgctgatcgaaccgcgcgccttcctcacc
accgtggccaagcgcgtgctgtacaacttctatcgccgccaggacctcgaacgcgcctac
ctcgaaactctcgcgcagatgcccgagcaggtagcgccctcggaagaagaacgcgcagtc
atcctgcaaaccctgatggagctggaccaattgctcgacggcctgcccgttcaggtcaaa
cgcgcctttctgctggcccagctcgacggcctcacttacgcgcagatcggcgccgagttg
ggcatctccatcgccaccgtcaaacgccacctgcataaagcggcgctgcgctgctacttc
gccctatga
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integrated database retrieval system
