Pseudomonas rhodesiae: HRH33_06240
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Entry
HRH33_06240 CDS
T07097
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRH33_06240
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prx02000
]
HRH33_06240
Transporters [BR:
prx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HRH33_06240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
Motif
Other DBs
NCBI-ProteinID:
QKJ72182
LinkDB
All DBs
Position
1393422..1394600
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AA seq
392 aa
AA seq
DB search
MITLRVLGTSVTLLECLRVRAEQELGIRLVYQVHDVEQAQRIAVMQPDSYDLYDQWFHNV
DFVWPARAIQPIDTRRIALWHEINDLPKRGRLSPNDRLGSGSVPSERLFVQHDGSLGSTV
TERISMLPLTHNADSFAYRPERLPAGFCRGNESWGWLLDPAWRARTALQSDAAIGALDAA
LAVQGAGLASFRDIGNMSIEDIDVLADILVRKQKEGHFAAFWSDDEEAAQLMLSPSIDIQ
SLWSPTLMRLHRAGVKYRLAVPREGYRAWFGGLSLSRHAQGPVLDAAYAYLNWWLSGWPG
AVMARQGYYIGNPARTRDHLSAAEWDYWYAGKPAREELPGSDGLPLIDRGEVRDGGSYEQ
RMGHIAVWNAVMDEHNYLVRRWGDFMRARGPA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgatcacactgcgcgtcctcggcacctcggtgacattgctcgaatgtttgcgcgtgcgg
gccgagcaggaacttggcattcgcctggtctatcaggtgcacgatgtcgagcaggcccag
cgtattgcggtgatgcagcccgacagttacgacctttacgatcaatggtttcacaacgtc
gacttcgtctggccggcgcgggcgatccagcccatcgacacgcgccgcatcgcgctgtgg
cacgagatcaacgacttgcccaagcgcgggcgcctgagccccaacgaccgcctgggcagt
ggcagcgtgcccagcgagcggctgttcgtgcagcacgacggcagcctcggcagcaccgtg
accgaacgtatcagcatgctgcccctgacccacaacgccgacagttttgcctaccgcccc
gagcgtctgcccgcaggcttttgccggggcaacgaaagttggggctggctgctggacccg
gcgtggcgcgcgcgcaccgcactgcaaagcgacgccgccattggcgcactggatgccgcg
ctggcggtgcagggcgccgggctcgccagtttccgcgacatcggcaatatgagcatcgag
gacatcgacgtgctcgccgacatcctggtgcgcaagcagaaggaggggcacttcgcggcg
ttctggtcagacgacgaagaagccgcgcaactgatgctcagccccagtatcgatatccag
agcctgtggtctccaaccttgatgcgcctgcatcgcgccggtgtgaagtaccgcctggcg
gtgccgcgcgaaggctatcgcgcctggttcggcggtttgtcgttatcgcgccatgcccag
ggcccggtgctggatgccgcctacgcgtacctcaactggtggctgtccggctggcccggt
gcggtgatggcgcgtcaggggtattacatcggcaacccggcccgcacgcgcgaccatttg
agcgccgccgagtgggattactggtacgccggcaagcccgcccgtgaagaactgccgggc
agcgatggcctgccgctgatcgaccggggcgaggtgcgcgacggcggctcctatgaacag
cgtatgggccacatcgcggtgtggaacgcggtgatggacgagcacaactacctggtgcgc
cgctggggcgatttcatgcgcgcgcgagggccggcctga
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