Pseudomonas rhodesiae: HRH33_06890
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Entry
HRH33_06890 CDS
T07097
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
prx
Pseudomonas rhodesiae
Pathway
prx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HRH33_06890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prx02000
]
HRH33_06890
Transporters [BR:
prx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HRH33_06890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Glyco_hydro_62
Ral
Motif
Other DBs
NCBI-ProteinID:
QKJ72303
LinkDB
All DBs
Position
complement(1544548..1545699)
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AA seq
383 aa
AA seq
DB search
MSAHKTALLSALTTALLASASLQAAEPLKAVGAGEGQLDIVAWPGYIERGESDKAYDWVS
GFEKETGCKVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIVGKRVQPINTALIPNW
KNLDPRLKDAPWYVVGQQTYGTPYQWGPNVLMYNTSVFKTAPTSWSVLFDPQNLPDGKPN
KGRVQAYDGPIYIADAALYLKATKPELGIQSPYELTEAQYKAVLDLLRAQQPLIHRYWHD
TTVQMSDFKNEGVVASSAWPYQVNGLVNEKQPIASTIPKEGATGWADTTMLHSEAKHPNC
AYKWMDWSLQPKVQGDVAAWFGSLPAVPAACKESELLGAEGCKTNGFDQFDKIAFWKTPQ
AEGGKFVPYSRWTQDYIAIMGGR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgcacaagaccgcactgctcagtgccttgaccaccgcgctgctggccagcgcc
agcctgcaagccgccgaaccgctcaaggcggtcggcgccggcgaaggccagttggatatc
gtcgcctggcccggctatatcgaacgtggcgaaagcgacaaagcctacgattgggtcagc
ggtttcgagaaggaaaccggctgcaaggtcaatgtgaaaaccgccgccacctctgatgaa
atggtcagcctgatggccaagggcggctatgacctggtcaccgcctccggcgatgcgtcg
ctgcggttgatcgtcggcaagcgtgtgcagccgatcaacaccgcgctgattcccaactgg
aaaaacctcgacccgcgcctcaaggatgcgccgtggtacgtggtcggccagcaaacctat
ggcaccccgtaccagtgggggccgaacgtgctgatgtacaacaccagcgtgttcaagacc
gcgcccactagctggagcgtgctgttcgacccgcagaacctgccggacggcaagcccaac
aagggccgcgtgcaggcctatgacggcccgatctacatcgccgacgcggcgctgtacctc
aaggccaccaaaccggagctgggaatccagagcccctacgagctgaccgaagcgcaatac
aaggccgtgctcgacctgctgcgcgcccagcaaccgctgatccaccgttactggcacgac
accaccgtgcaaatgagcgacttcaagaacgaaggcgtggtggcctccagtgcctggccg
taccaagtcaacgggctggtcaacgagaaacagccgatcgcctcgaccatccccaaggaa
ggcgccaccggttgggccgacaccaccatgctgcacagcgaggccaagcaccctaactgc
gcttacaagtggatggactggtcgctgcagccgaaggtccagggcgatgtcgccgcctgg
ttcggctcgctgccggcggtgccggccgcgtgtaaagagagcgaattgctcggcgccgag
ggttgcaagaccaatggcttcgaccagttcgacaagatcgccttctggaaaaccccacag
gctgaaggcggcaagttcgtgccgtacagccgctggacccaggactacattgcgatcatg
ggcggccgttaa
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